Hs03426969_cn

• Gene Symbol: FAM178B
• Assay Reference Genome Location: Chr.2:96925393 on build GRCh38
• Cytoband: 2q11.2

Target Gene Details

• Entrez Gene ID: 51252
• Gene Name: family with sequence similarity 178 member B
• Gene Aliases: -
• Location: Chr.2:96875882-96986600 on Build GRCh38
• Assay Gene Location: Within Intron 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM178B	NM_001122646.2			NP_001116118.2
	XM_011511294.2			XP_011509596.1
	XM_017004263.1			XP_016859752.1
	XM_017004264.1			XP_016859753.1
	XM_017004265.1			XP_016859754.1
	XM_017004266.1			XP_016859755.1
	AK122705.1
	AK308698.1
	BC039488.1			AAH39488.1
	DA357118.1

Target Gene Details

• Entrez Gene ID: 101927053
• Gene Name: uncharacterized LOC101927053
• Gene Aliases: -
• Location: Chr.2:96919106-96925837 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC101927053	NR_110209.1	3	1816

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv582497	Chr.2:96903568 - 97049417 on Build GRCh38	Loss	LOC101927053 FAM178B
nsv526313	Chr.2:96667755 - 96994882 on Build GRCh38	Loss	LMAN2L SEMA4C FER1L5 CNNM4 CNNM3 LOC101927053 ANKRD23 ANKRD39 MIR3127 FAM178B
dgv607e201	Chr.2:95855884 - 97561622 on Build GRCh38	Deletion	TMEM127 CNNM3 DUSP2 ASTL ARID5A GPAT2 FER1L5 CIAO1 LOC101927053 FAHD2B ANKRD39 SNRNP200 MIR3127 ANKRD36 SEMA4C NCAPH LOC100506076 LOC107984110 LOC653924 ANKRD36C STARD7-AS1 NEURL3 LOC100506123 LOC105373495 ANKRD23 FAHD2CP ADRA2B LOC105373496 STARD7 FAM178B LMAN2L CNNM4 ITPRIPL1 KANSL3 ANKRD36B
nsv1135873	Chr.2:95981454 - 97579645 on Build GRCh38	Deletion	TMEM127 CNNM3 DUSP2 ASTL ARID5A GPAT2 FER1L5 CIAO1 LOC101927053 FAHD2B ANKRD39 SNRNP200 MIR3127 ANKRD36 SEMA4C NCAPH LOC100506076 LOC107984110 LOC653924 ANKRD36C STARD7-AS1 NEURL3 LOC100506123 LOC105373495 ANKRD23 FAHD2CP ADRA2B LOC105373496 STARD7 FAM178B LMAN2L CNNM4 ITPRIPL1 KANSL3 ANKRD36B
esv2759077	Chr.2:96905372 - 97720044 on Build GRCh38	Gain+Loss	ANKRD36 LINC01125 LOC100506076 LOC653924 ZAP70 LOC101927053 LOC100506123 ANKRD36B FAHD2B ACTR1B COX5B FAM178B
esv3425717	Chr.2:95859900 - 97515905 on Build GRCh38	Duplication	TMEM127 CNNM3 DUSP2 ASTL ARID5A GPAT2 FER1L5 CIAO1 LOC101927053 FAHD2B ANKRD39 SNRNP200 MIR3127 ANKRD36 SEMA4C NCAPH LOC100506076 LOC107984110 LOC653924 ANKRD36C STARD7-AS1 NEURL3 LOC100506123 LOC105373495 ANKRD23 FAHD2CP ADRA2B LOC105373496 STARD7 FAM178B LMAN2L CNNM4 ITPRIPL1 KANSL3 ANKRD36B

More Information

Additional Information:

For this assay, SNP(s) [rs72942938] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation