Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 5130 |
Gene Name: | phosphate cytidylyltransferase 1, choline, alpha |
Gene Aliases: |
CCTA, CT, CTA, CTPCT, PCYT1, SMDCRD |
Location: |
Chr.3:196237745-196287752 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PCYT1A | NM_001312673.1 | NP_001299602.1 | ||
| NM_005017.3 | NP_005008.2 | |||
| AK304534.1 | ||||
| AK309073.1 | ||||
| AK309300.1 | ||||
| AK313450.1 | ||||
| BC046355.1 | AAH46355.1 | |||
| L28957.1 | AAA72127.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv3599278 | Chr.3:196229547 - 196249176 on Build GRCh38 | Gain |
 PCYT1A
SLC51A
|
| nsv997797 | Chr.3:195931489 - 196486087 on Build GRCh38 | Gain |
TM4SF19-AS1
RNF168
TCTEX1D2
TM4SF19
UBXN7-AS1
LINC00885
ZDHHC19
TM4SF19-TCTEX1D2
UBXN7
PCYT1A
LOC105374301
SDHAP1
SLC51A
TFRC
|
| esv3599276 | Chr.3:196227560 - 196295937 on Build GRCh38 | Loss |
TCTEX1D2
PCYT1A
SLC51A
|
| nsv1009811 | Chr.3:196124925 - 196411200 on Build GRCh38 | Gain |
ZDHHC19
TM4SF19-AS1
TCTEX1D2
TM4SF19-TCTEX1D2
UBXN7
PCYT1A
TM4SF19
SLC51A
LINC00885
|
| nsv593071 | Chr.3:196132016 - 196345571 on Build GRCh38 | Gain |
ZDHHC19
TM4SF19-AS1
TCTEX1D2
TM4SF19-TCTEX1D2
PCYT1A
TM4SF19
SLC51A
LINC00885
|
| nsv1008512 | Chr.3:195982791 - 196248065 on Build GRCh38 | Gain |
ZDHHC19
PCYT1A
LOC105374301
SDHAP1
SLC51A
LINC00885
TFRC
|
| esv2759213 | Chr.3:195382058 - 196344722 on Build GRCh38 | Gain+Loss |
TM4SF19-AS1
TCTEX1D2
LINC00969
ACAP2
TM4SF19
MUC4
MIR6829
TNK2
LINC00885
APOD
LOC105374297
SDHAP2
MIR570
ZDHHC19
PPP1R2
TM4SF19-TCTEX1D2
PCYT1A
LOC105374301
MUC20
SDHAP1
SLC51A
LOC101929697
LOC105374299
TFRC
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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