Hs03464085_cn

• Gene Symbol: SLC51A
• Assay Reference Genome Location: Chr.3:196226444 on build GRCh38
• Cytoband: 3q29

Target Gene Details

• Entrez Gene ID: 200931
• Gene Name: solute carrier family 51 alpha subunit
• Gene Aliases: OSTA, OSTalpha
• Location: Chr.3:196216512-196233430 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC51A	NM_152672.5			NP_689885.4
	AK172837.1			BAD18802.1
	AK300996.1
	AY194243.1			AAP23993.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv521280	Chr.3:196222670 - 196228601 on Build GRCh38	Loss	SLC51A
nsv997797	Chr.3:195931489 - 196486087 on Build GRCh38	Gain	PCYT1A TM4SF19-TCTEX1D2 UBXN7 TM4SF19 LINC00885 TCTEX1D2 ZDHHC19 LOC105374301 TFRC SLC51A SDHAP1 RNF168 UBXN7-AS1 TM4SF19-AS1
esv3569221	Chr.3:196209781 - 196229993 on Build GRCh38	Loss	ZDHHC19 SLC51A
nsv1009811	Chr.3:196124925 - 196411200 on Build GRCh38	Gain	ZDHHC19 PCYT1A TM4SF19-TCTEX1D2 UBXN7 SLC51A TM4SF19 LINC00885 TCTEX1D2 TM4SF19-AS1
nsv593071	Chr.3:196132016 - 196345571 on Build GRCh38	Gain	ZDHHC19 PCYT1A TM4SF19-TCTEX1D2 SLC51A TM4SF19 LINC00885 TCTEX1D2 TM4SF19-AS1
nsv1008512	Chr.3:195982791 - 196248065 on Build GRCh38	Gain	ZDHHC19 PCYT1A LOC105374301 TFRC SLC51A SDHAP1 LINC00885
esv2759213	Chr.3:195382058 - 196344722 on Build GRCh38	Gain+Loss	PCYT1A APOD TM4SF19-TCTEX1D2 MUC20 LOC101929697 TM4SF19 LINC00885 MUC4 TCTEX1D2 ZDHHC19 LOC105374301 LINC00969 SDHAP2 MIR6829 TFRC LOC105374297 SLC51A LOC105374299 SDHAP1 PPP1R2 TNK2 MIR570 TM4SF19-AS1 ACAP2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Process(es)

transport
bile acid and bile salt transport

Function(s)

transporter activity
protein homodimerization activity
protein heterodimerization activity