Hs03481924_cn

• Gene Symbol: TM4SF19
• Assay Reference Genome Location: Chr.3:196335854 on build GRCh38
• Cytoband: 3q29

Target Gene Details

• Entrez Gene ID: 116211
• Gene Name: transmembrane 4 L six family member 19
• Gene Aliases: OCTM4
• Location: Chr.3:196323546-196338420 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TM4SF19	NM_001204897.1			NP_001191826.1
	NM_001204898.1			NP_001191827.1
	NM_138461.3			NP_612470.2
	AF192910.1			AAQ13824.1
	AK310209.1
	BC146985.1
	BC146993.1
	BC147021.1
	BC171870.1
	BQ678650.1
	CA489370.1
	DB015357.1

Target Gene Details

• Entrez Gene ID: 100534611
• Gene Name: TM4SF19-TCTEX1D2 readthrough (NMD candidate)
• Gene Aliases: -
• Location: Chr.3:196316085-196338420 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TM4SF19-TCTEX1D2	NR_037950.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv593085	Chr.3:196334962 - 196337052 on Build GRCh38	Gain+Loss	TM4SF19-TCTEX1D2 TM4SF19
nsv997797	Chr.3:195931489 - 196486087 on Build GRCh38	Gain	SDHAP1 UBXN7 TM4SF19-TCTEX1D2 LINC00885 RNF168 TCTEX1D2 UBXN7-AS1 PCYT1A TFRC TM4SF19-AS1 TM4SF19 LOC105374301 SLC51A ZDHHC19
nsv593083	Chr.3:196334911 - 196339698 on Build GRCh38	Gain	TM4SF19-TCTEX1D2 TM4SF19
nsv1009811	Chr.3:196124925 - 196411200 on Build GRCh38	Gain	UBXN7 TM4SF19-TCTEX1D2 LINC00885 TM4SF19-AS1 TM4SF19 TCTEX1D2 SLC51A PCYT1A ZDHHC19
nsv593071	Chr.3:196132016 - 196345571 on Build GRCh38	Gain	TM4SF19-TCTEX1D2 LINC00885 TM4SF19-AS1 TM4SF19 TCTEX1D2 SLC51A PCYT1A ZDHHC19
nsv4183	Chr.3:196307196 - 196352238 on Build GRCh38	Deletion	UBXN7 TM4SF19-TCTEX1D2 TM4SF19-AS1 TM4SF19 TCTEX1D2
esv2759213	Chr.3:195382058 - 196344722 on Build GRCh38	Gain+Loss	LINC00969 SDHAP1 LOC105374297 PPP1R2 TM4SF19-TCTEX1D2 MIR570 LINC00885 MUC4 APOD TCTEX1D2 PCYT1A MUC20 TFRC ACAP2 TNK2 TM4SF19-AS1 TM4SF19 MIR6829 LOC105374301 SLC51A LOC105374299 SDHAP2 LOC101929697 ZDHHC19

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation