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See other PDLIM3 CNV Assays ›
Gene Symbol
PDLIM3
Assay Reference Genome
Location

Chr.4:185518298 on build GRCh38
Cytoband
4q35.1
Assay ID Hs03513087_cn
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Assay Details

Target Gene Details

Entrez Gene ID:

 27295

Gene Name:

 PDZ and LIM domain 3

Gene Aliases:

 ALP

Location:

 Chr.4:185500660-185535606 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PDLIM3 NM_001114107.4 NP_001107579.1
NM_001257962.1 NP_001244891.1
NM_001257963.1 NP_001244892.1
NM_014476.5 NP_055291.2
NR_047562.1
AF002280.1 AAC16670.1
AF002282.1 AAC16672.1
AF039018.1 AAB96665.1
AK129863.1
AK222966.1 BAD96686.1
AK313253.1
BC027870.1 AAH27870.1
BI913867.1
BT007341.1 AAP36005.1
C03422.1
DA898089.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv596373 Chr.4:185451672 - 185605031 on Build GRCh38 Gain PDLIM3 SORBS2 LOC105377590 CCDC110
dgv5493n100 Chr.4:185446588 - 185605031 on Build GRCh38 Gain PDLIM3 SORBS2 C4orf47 LOC105377590 CCDC110
esv3603496 Chr.4:185447616 - 185603060 on Build GRCh38 Gain PDLIM3 SORBS2 C4orf47 LOC105377590 CCDC110
nsv517035 Chr.4:185445161 - 185600889 on Build GRCh38 Gain+Loss PDLIM3 SORBS2 C4orf47 LOC105377590 CCDC110
nsv527026 Chr.4:185404275 - 185632326 on Build GRCh38 Gain PDLIM3 UFSP2 SORBS2 C4orf47 LOC105377590 CCDC110
nsv508339 Chr.4:185501498 - 185533923 on Build GRCh38 Deletion PDLIM3
esv2759309 Chr.4:185391971 - 185553542 on Build GRCh38 Loss PDLIM3 UFSP2 C4orf47 LOC105377590 ANKRD37 CCDC110 LRP2BP
nsv4639 Chr.4:185485731 - 185524173 on Build GRCh38 Deletion PDLIM3
nsv596374 Chr.4:185515495 - 185524265 on Build GRCh38 Gain PDLIM3

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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