Name: [Hs03557527_cn] [MGAT1]
Creator: Thermo Fisher Scientific
Keywords: [MGAT1] Assay, [mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	4245
Gene Name:	mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
Gene Aliases:	GLCNAC-TI, GLCT1, GLYT1, GNT-1, GNT-I, GnTI, MGAT
Location:	Chr.5:180790541-180815652 on Build GRCh38
Assay Gene Location:	Within Intron 6

Gene Symbol	Transcript Accession	Protein ID
MGAT1	NM_001114617.1	NP_001108089.1
	NM_001114618.1	NP_001108090.1
	XM_005265915.1	XP_005265972.1
	XM_005265916.1	XP_005265973.1
	XM_006714866.1	XP_006714929.1
	XM_011534559.1	XP_011532861.1
	XM_011534560.1	XP_011532862.1
	XM_011534561.1	XP_011532863.1
	XM_011534562.1	XP_011532864.1
	XM_011534563.2	XP_011532865.1
	XM_017009486.1	XP_016864975.1
	XM_017009487.1	XP_016864976.1
	AK057194.1
	AK092256.1
	AK094130.1
	BC003575.1	AAH03575.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1161322	Chr.5:180717688 - 180914895 on Build GRCh38	Duplication	BTNL8 ZFP62 OR2Y1 HEIH LINC00847 MGAT1
nsv428133	Chr.5:180805451 - 181359487 on Build GRCh38	Gain	OR2V2 OR2V1 MIR4638 TRIM52-AS1 SNORD96A BTNL9 CTC-338M12.4 BTNL8 MIR8089 OR4F3 LOC100132062 RACK1 TRIM52 LOC102577426 ZFP62 BTNL3 HEIH SNORD95 LINC00847 TRIM41 TRIM7 MGAT1
dgv9n29	Chr.5:180758452 - 180976232 on Build GRCh38	Loss	BTNL8 ZFP62 HEIH LINC00847 MGAT1
esv2759399	Chr.5:180652970 - 180854476 on Build GRCh38	Gain	ZFP62 OR2Y1 HEIH LINC00847 MGAT1
nsv1026417	Chr.5:180294376 - 180864360 on Build GRCh38	Gain	CNOT6 FLT4 SCGB3A1 ZFP62 OR2Y1 HEIH LINC00847 GFPT2 MGAT1