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See other OCLN CNV Assays ›
Gene Symbol
OCLN
Assay Reference Genome
Location

Chr.5:69505724 on build GRCh38
Cytoband
5q13.2
Assay ID Hs03567896_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100506658

Gene Name:

 occludin

Gene Aliases:

 BLCPMG, PPP1R115

Location:

 Chr.5:69492292-69558104 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OCLN NM_001205254.1 NP_001192183.1
NM_001205255.1 NP_001192184.1
NM_002538.3 NP_002529.1
XM_017008913.1 XP_016864402.1
XM_017008914.1 XP_016864403.1
AB451306.1
AB451437.1
AK290697.1
AK313501.1
BC029886.1 AAH29886.1
DB226845.1
FJ786083.1
FJ786084.1
GQ225096.1
GQ225097.1
GQ225098.1
GQ402517.1
U49184.1 AAC50451.1
U53823.1 AAB00195.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3570182 Chr.5:69457781 - 69533508 on Build GRCh38 Loss LOC101928924 OCLN
nsv1034024 Chr.5:69464444 - 69822296 on Build GRCh38 Gain LOC101928924 OCLN LOC728488 GTF2H2C GUSBP3
nsv821643 Chr.5:69272838 - 71076658 on Build GRCh38 Loss TAF9 LOC728488 CDK7 SMA4 SERF1A GTF2H2 LOC728526 LOC441081 GTF2H2C GTF2H2B GUSBP3 LOC101928924 SMN1 MARVELD2 AK6 CCDC125 SMN2 NAIP LOC101929599 SERF1B SMA5 LOC107986354 OCLN LOC647859 RAD17 LOC107986351 LOC653080
nsv1023116 Chr.5:69448480 - 69571455 on Build GRCh38 Gain LOC101928924 OCLN GTF2H2C
nsv428117 Chr.5:69347454 - 71500057 on Build GRCh38 Gain+Loss TAF9 LOC728488 SMA4 SERF1A LOC102724392 GTF2H2 LOC728526 LOC441081 LOC107986352 GTF2H2C GTF2H2B GUSBP3 GUSBP9 LOC101928924 SMN1 MARVELD2 AK6 SMN2 LOC107986353 NAIP LOC101929599 SERF1B SMA5 LOC107986354 OCLN LOC647859 RAD17 LOC107986351 LOC653080 BDP1 PMCHL2

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