Hs03590337_cn

• Gene Symbol: TTLL2
• Assay Reference Genome Location: Chr.6:167325891 on build GRCh38
• Cytoband: 6q27

Target Gene Details

• Entrez Gene ID: 83887
• Gene Name: tubulin tyrosine ligase like 2
• Gene Aliases: C6orf104, NYD-TSPG, dJ366N23.3
• Location: Chr.6:167325086-167342710 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TTLL2	NM_031949.4			NP_114155.4
	XM_006715572.3			XP_006715635.1
	AK093039.1
	AK225984.1
	AK301755.1
	AK314450.1
	AY026506.1			AAK20169.1
	BC047411.1			AAH47411.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3282385	Chr.6:167250001 - 167408719 on Build GRCh38	Deletion	TTLL2 UNC93A TCP10
dgv6196n100	Chr.6:167194096 - 167396465 on Build GRCh38	Gain	TCP10L2 TTLL2 UNC93A TCP10
esv3611649	Chr.6:167155684 - 167512132 on Build GRCh38	Gain	LOC105378127 GPR31 TCP10L2 LOC105378123 TTLL2 UNC93A TCP10
dgv6198n100	Chr.6:167281723 - 167382413 on Build GRCh38	Gain	TTLL2 UNC93A TCP10
nsv1024654	Chr.6:167249012 - 167405373 on Build GRCh38	Loss	TTLL2 UNC93A TCP10
esv34252	Chr.6:167208101 - 167399010 on Build GRCh38	Gain	TTLL2 UNC93A TCP10
esv24545	Chr.6:167196031 - 167368455 on Build GRCh38	Gain+Loss	TCP10L2 TTLL2 UNC93A TCP10
nsv464145	Chr.6:167311162 - 167365010 on Build GRCh38	Loss	TTLL2 UNC93A TCP10
esv2733230	Chr.6:167249885 - 167408649 on Build GRCh38	Deletion	TTLL2 UNC93A TCP10
esv2761058	Chr.6:167283022 - 167382425 on Build GRCh38	Gain	TTLL2 UNC93A TCP10
nsv605338	Chr.6:167158423 - 167420069 on Build GRCh38	Gain	TCP10L2 LOC105378123 TTLL2 UNC93A TCP10
nsv949893	Chr.6:167316413 - 167330812 on Build GRCh38	Deletion	TTLL2
esv2759492	Chr.6:167087716 - 167776053 on Build GRCh38	Gain	LOC105378127 LOC105378130 GPR31 TCP10L2 CCR6 LOC105378123 TTLL2 LOC401286 UNC93A TCP10 LOC441178
nsv470873	Chr.6:167159054 - 167430772 on Build GRCh38	Gain	TCP10L2 LOC105378123 TTLL2 UNC93A TCP10
esv3576253	Chr.6:167194514 - 167805095 on Build GRCh38	Gain	LOC105378127 LOC105378130 TCP10L2 LOC441179 TTLL2 LOC401286 UNC93A TCP10 LOC441178 LINC01558
nsv517210	Chr.6:167269581 - 167365010 on Build GRCh38	Gain+Loss	TTLL2 UNC93A TCP10
dgv6194n100	Chr.6:167156031 - 167425505 on Build GRCh38	Gain	GPR31 TCP10L2 LOC105378123 TTLL2 UNC93A TCP10
esv3611659	Chr.6:167323380 - 167358297 on Build GRCh38	Loss	TTLL2 TCP10
esv3611656	Chr.6:167263655 - 167354718 on Build GRCh38	Loss	TTLL2 UNC93A
dgv6197n100	Chr.6:167267069 - 167382413 on Build GRCh38	Loss	TTLL2 UNC93A TCP10
nsv1022342	Chr.6:167323382 - 167367706 on Build GRCh38	Loss	TTLL2 TCP10
dgv11056n54	Chr.6:167198269 - 167370176 on Build GRCh38	Gain	TTLL2 UNC93A TCP10

More Information

Additional Information:

For this assay, SNP(s) [rs76142421] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

microtubule or microtubule-binding cytoskeletal protein

Gene Ontology Categories:

Process(es)

cellular protein modification process

Function(s)

ATP binding
ligase activity