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See other NFKBIL1 CNV Assays ›
Gene Symbol
NFKBIL1
Assay Reference Genome
Location

Chr.6:31556350 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03614201_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 4795

Gene Name:

 NFKB inhibitor like 1

Gene Aliases:

 IKBL, LST1, NFKBIL

Location:

 Chr.6:31546851-31558829 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NFKBIL1 NM_001144961.1 NP_001138433.1
NM_001144962.1 NP_001138434.1
NM_001144963.1 NP_001138435.1
NM_005007.3 NP_004998.3
AF097419.1 AAD38108.1
AF097420.1 AAD38109.1
AF097421.1 AAD38110.1
AF097422.1 AAD38111.1
AF097423.1 AAD38112.1
AF097424.1 AAD38113.1
AF097425.1 AAD38114.1
AF097426.1 AAD38115.1
AF097427.1 AAD38116.1
AF097428.1 AAD38117.1
AF097429.1 AAD38118.1
AK291893.1
AK300818.1
AK313888.1
BC105064.1 AAI05065.1
BC105068.1 AAI05069.1
BC143671.1
BM044744.1
DC370256.1
X77909.1 CAA54867.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759414 Chr.6:31060513 - 31574531 on Build GRCh38 Gain+Loss POU5F1 MICB C6orf15 SNORD84 MICA CDSN PSORS1C3 NFKBIL1 ATP6V1G2-DDX39B HLA-C DDX39B-AS1 PSORS1C2 SNORD117 LOC100287329 MCCD1 MIR6891 ATP6V1G2 LTA CCHCR1 LOC102725068 TCF19 PSORS1C1 HCG26 HLA-B HCG27 DDX39B HCP5
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion NCR3 HSPA1B LY6G5B MIR6833 HLA-DRB1 C2 LY6G6D LTB CYP21A1P C4B STK19 NFKBIL1 SAPCD1-AS1 NELFE ATP6V1G2-DDX39B CYP21A2 C4A APOM MIR6721 AIF1 SNORD52 HSPA1A MSH5 MIR6832 CLIC1 NOTCH4 MSH5-SAPCD1 SNORD48 BAG6 LY6G6C C6orf10 ATP6V1G2 PRRC2A RNF5 TNXB SKIV2L VWA7 EHMT2 TNXA LY6G6E LY6G6F ZBTB12 MICB DXO SNORD84 ATF6B ABHD16A SNORA38 LSM2 PBX2 BTNL2 C6orf47 EGFL8 SLC44A4 MIR1236 PPT2-EGFL8 PPT2 HLA-DRB5 C6orf25 AGER DDX39B-AS1 LOC101929163 DDAH2 CFB GPSM3 LST1 FKBPL HLA-DRB6 C2-AS1 TNF SNORD117 LOC100287329 MCCD1 HSPA1L MIR4646 LOC100507547 AGPAT1 LTA LY6G5C LOC102725068 HCG23 C6orf48 GPANK1 NEU1 CSNK2B HCG26 DDX39B HLA-DRA SAPCD1 VARS PRRT1 HCP5
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HSPA1B LY6G5B C2 PHF1 HCG24 STK19 NFKBIL1 HLA-DMA NELFE ATP6V1G2-DDX39B CYP21A2 SYNGAP1 C4A APOM MIR6721 TAPBP SNORD52 TAP1 HSPA1A MIR219A1 MIR6832 COL11A2 PSMB8-AS1 NOTCH4 CUTA MSH5-SAPCD1 HLA-DPA1 PRRC2A RNF5 KIFC1 EHMT2 LY6G6E LY6G6F ZBTB12 ATF6B ABHD16A PPP1R2P1 SNORA38 LSM2 EGFL8 PPT2-EGFL8 HLA-DRB5 HLA-DPB1 VPS52 C6orf25 MIR6873 AGER DDX39B-AS1 HLA-DOA CFB SLC39A7 HLA-DQA2 HSD17B8 FKBPL HLA-DRB6 SNORD117 LOC100287329 RPS18 HSPA1L AGPAT1 LTA LOC102725068 C6orf48 NEU1 CSNK2B HCG26 ZBTB9 VARS NCR3 MIR6833 HLA-DRB1 LY6G6D LTB HLA-DQB2 CYP21A1P C4B SAPCD1-AS1 DAXX WDR46 AIF1 HLA-DQB1 PSMB9 MSH5 CLIC1 SNORD48 BAG6 LY6G6C C6orf10 ATP6V1G2 HLA-DPB2 PFDN6 TNXB MIR3135B SKIV2L LOC100294145 VWA7 TNXA PSMB8 MICB DXO SNORD84 PBX2 BTNL2 C6orf47 SLC44A4 ZBTB22 MIR1236 PPT2 MIR6834 HLA-DQB1-AS1 LOC101929163 B3GALT4 HLA-DMB HCG25 DDAH2 RING1 GPSM3 LST1 C2-AS1 TNF MCCD1 MIR4646 LOC100507547 RXRB LY6G5C HLA-DQA1 HCG23 GPANK1 HLA-DOB BRD2 DDX39B RGL2 HLA-DRA SAPCD1 MIR5004 TAP2 PRRT1 HCP5
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss NCR3 HSPA1B LY6G5B C2 MICA LY6G6D LTB CYP21A1P C4B STK19 NFKBIL1 SAPCD1-AS1 NELFE ATP6V1G2-DDX39B CYP21A2 C4A APOM AIF1 SNORD52 HSPA1A MSH5 MIR6832 CLIC1 MSH5-SAPCD1 SNORD48 BAG6 LY6G6C ATP6V1G2 PRRC2A TNXB SKIV2L VWA7 EHMT2 TNXA LY6G6E LY6G6F ZBTB12 MICB DXO SNORD84 ABHD16A SNORA38 LSM2 C6orf47 SLC44A4 MIR1236 C6orf25 DDX39B-AS1 DDAH2 CFB LST1 C2-AS1 TNF SNORD117 LOC100287329 MCCD1 HSPA1L MIR6891 MIR4646 LTA LY6G5C LOC102725068 C6orf48 GPANK1 NEU1 CSNK2B HCG26 HLA-B DDX39B SAPCD1 VARS HCP5
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HSPA1B LY6G5B C2 PHF1 HCG24 STK19 NFKBIL1 HLA-DMA NELFE ATP6V1G2-DDX39B CYP21A2 SYNGAP1 C4A APOM MIR6721 TAPBP SNORD52 TAP1 HSPA1A MIR219A1 MIR6832 COL11A2 PSMB8-AS1 NOTCH4 CUTA MSH5-SAPCD1 HLA-DPA1 PRRC2A RNF5 KIFC1 EHMT2 LY6G6E LY6G6F ZBTB12 ATF6B ABHD16A PPP1R2P1 SNORA38 LSM2 EGFL8 PPT2-EGFL8 HLA-DRB5 HLA-DPB1 VPS52 C6orf25 MIR6873 AGER DDX39B-AS1 HLA-DOA CFB SLC39A7 HLA-DQA2 HSD17B8 FKBPL HLA-DRB6 SNORD117 LOC100287329 RPS18 HSPA1L AGPAT1 LTA LOC102725068 C6orf48 NEU1 CSNK2B HCG26 ZBTB9 VARS NCR3 MIR6833 HLA-DRB1 LY6G6D LTB HLA-DQB2 CYP21A1P C4B SAPCD1-AS1 DAXX WDR46 AIF1 HLA-DQB1 PSMB9 MSH5 CLIC1 SNORD48 BAG6 LY6G6C C6orf10 ATP6V1G2 HLA-DPB2 PFDN6 TNXB MIR3135B SKIV2L LOC100294145 VWA7 TNXA PSMB8 MICB DXO SNORD84 PBX2 BTNL2 C6orf47 SLC44A4 ZBTB22 MIR1236 PPT2 MIR6834 HLA-DQB1-AS1 LOC101929163 B3GALT4 HLA-DMB HCG25 DDAH2 RING1 GPSM3 LST1 C2-AS1 TNF MCCD1 MIR4646 LOC100507547 RXRB LY6G5C HLA-DQA1 HCG23 GPANK1 HLA-DOB BRD2 DDX39B RGL2 HLA-DRA SAPCD1 MIR5004 TAP2 PRRT1 HCP5
nsv470809 Chr.6:31529138 - 31576412 on Build GRCh38 Loss ATP6V1G2-DDX39B TNF SNORD117 LOC100287329 MCCD1 SNORD84 DDX39B DDX39B-AS1 ATP6V1G2 NFKBIL1 LTA
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss NCR3 HSPA1B LY6G5B MIR6833 C2 MICA LY6G6D LTB CYP21A1P C4B STK19 NFKBIL1 SAPCD1-AS1 NELFE ATP6V1G2-DDX39B CYP21A2 C4A APOM MIR6721 AIF1 SNORD52 HSPA1A MSH5 MIR6832 CLIC1 NOTCH4 MSH5-SAPCD1 SNORD48 BAG6 LY6G6C C6orf10 ATP6V1G2 PRRC2A RNF5 TNXB SKIV2L VWA7 EHMT2 TNXA LY6G6E LY6G6F ZBTB12 MICB DXO SNORD84 ATF6B ABHD16A SNORA38 LSM2 PBX2 BTNL2 C6orf47 EGFL8 SLC44A4 MIR1236 PPT2-EGFL8 PPT2 C6orf25 AGER DDX39B-AS1 LOC101929163 DDAH2 CFB GPSM3 LST1 FKBPL C2-AS1 TNF SNORD117 LOC100287329 MCCD1 HSPA1L MIR6891 MIR4646 LOC100507547 AGPAT1 LTA LY6G5C LOC102725068 HCG23 C6orf48 GPANK1 NEU1 CSNK2B HCG26 HLA-B DDX39B HLA-DRA SAPCD1 VARS PRRT1 HCP5
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss NCR3 LY6G5B SNORD84 ABHD16A SNORA38 LTB NFKBIL1 C6orf47 ATP6V1G2-DDX39B APOM DDX39B-AS1 AIF1 LST1 MIR6832 TNF SNORD117 LOC100287329 MCCD1 BAG6 ATP6V1G2 LTA LY6G5C PRRC2A GPANK1 CSNK2B DDX39B

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