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See other PLOD3 CNV Assays ›
Gene Symbol
PLOD3
Assay Reference Genome
Location

Chr.7:101214958 on build GRCh38
Cytoband
7q22.1
Assay ID Hs03624874_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8985

Gene Name:

 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

Gene Aliases:

 LH3

Location:

 Chr.7:101205977-101217730 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLOD3 NM_001084.4 NP_001075.1
AF046889.1 AAC39753.1
AF068229.1 AAC34808.1
AK075338.1
AK297559.1
AK298537.1
AK312743.1
AY220458.1 AAO61775.1
BC011674.2 AAH11674.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3614321 Chr.7:101210074 - 101222993 on Build GRCh38 Gain ZNHIT1 PLOD3
dgv11534n54 Chr.7:101160859 - 101238359 on Build GRCh38 Loss ZNHIT1 MOGAT3 CLDN15 NAT16 PLOD3 VGF AP1S1
nsv607973 Chr.7:101139179 - 101230554 on Build GRCh38 Loss SERPINE1 ZNHIT1 MOGAT3 MIR4653 NAT16 PLOD3 VGF AP1S1
nsv1018841 Chr.7:101117129 - 101225018 on Build GRCh38 Gain SERPINE1 ZNHIT1 MOGAT3 MIR4653 NAT16 PLOD3 VGF AP1S1
esv2422376 Chr.7:101100204 - 101373190 on Build GRCh38 Duplication LOC101927721 ZNHIT1 CLDN15 AP1S1 SERPINE1 MOGAT3 FIS1 COL26A1 MIR4653 LOC101927746 IFT22 NAT16 PLOD3 VGF
esv2422326 Chr.7:101190168 - 101356850 on Build GRCh38 Duplication LOC101927721 ZNHIT1 MOGAT3 FIS1 CLDN15 LOC101927746 IFT22 PLOD3
nsv1030604 Chr.7:101074451 - 101580185 on Build GRCh38 Gain LOC101927721 ZNHIT1 CLDN15 LINC01007 AP1S1 SERPINE1 TRIM56 MOGAT3 FIS1 COL26A1 MIR4653 LOC101927746 IFT22 NAT16 PLOD3 VGF
esv2752134 Chr.7:101156850 - 101498586 on Build GRCh38 Gain LOC101927721 ZNHIT1 CLDN15 AP1S1 MOGAT3 FIS1 COL26A1 MIR4653 LOC101927746 IFT22 NAT16 PLOD3 VGF
esv2734888 Chr.7:99975623 - 101290285 on Build GRCh38 Deletion UFSP1 TAF6 CNPY4 AP4M1 LRCH4 PVRIG2P MIR4658 STAG3L5P-PVRIG2P-PILRB AP1S1 SERPINE1 SAP25 PCOLCE MUC3A FIS1 MIR6840 LOC102724094 C7orf61 PCOLCE-AS1 EPO POP7 MEPCE MOSPD3 PMS2P1 AZGP1P1 PILRA MIR6875 GATS PILRB ZASP ZNHIT1 GPC2 TSC22D4 LAMTOR4 MIR25 FBXO24 TRIP6 MIR106B C7orf43 NYAP1 AGFG2 TRIM56 ACTL6B GNB2 SLC12A9 MOGAT3 LOC105375429 MIR4653 PVRIG STAG3 MCM7 ZNF3 MIR93 GAL3ST4 AZGP1 ZCWPW1 MUC17 ZSCAN21 COPS6 MBLAC1 NAT16 ACHE EPHB4 SPDYE3 TFR2 PPP1R35 CLDN15 STAG3L5P MUC12 ZKSCAN1 SRRT ZAN GIGYF1 PLOD3 VGF
nsv831075 Chr.7:101049016 - 101273737 on Build GRCh38 Loss SERPINE1 ZNHIT1 TRIM56 MOGAT3 FIS1 CLDN15 MIR4653 NAT16 PLOD3 VGF AP1S1 MUC17
nsv607974 Chr.7:101149529 - 101328323 on Build GRCh38 Loss LOC101927721 ZNHIT1 MOGAT3 FIS1 CLDN15 MIR4653 LOC101927746 IFT22 NAT16 PLOD3 VGF AP1S1
esv3614319 Chr.7:101206795 - 101265542 on Build GRCh38 Gain ZNHIT1 FIS1 CLDN15 PLOD3
nsv831076 Chr.7:101185566 - 101368393 on Build GRCh38 Loss LOC101927721 ZNHIT1 MOGAT3 FIS1 COL26A1 CLDN15 LOC101927746 IFT22 PLOD3

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