Hs03627446_cn

• Gene Symbol: ZNHIT1
• Assay Reference Genome Location: Chr.7:101222183 on build GRCh38
• Cytoband: 7q22.1

Target Gene Details

• Entrez Gene ID: 10467
• Gene Name: zinc finger HIT-type containing 1
• Gene Aliases: CG1I, ZNFN4A1
• Location: Chr.7:101217704-101224191 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZNHIT1	NM_006349.2			NP_006340.1
	XM_011515739.2			XP_011514041.1
	AF093571.1			AAF03558.1
	AK092478.1	1	1472
	AK125123.1
	AK312136.1
	BC017333.2			AAH17333.1
	CR456992.1			CAG33273.1
	U61837.1			AAB88578.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3614321	Chr.7:101210074 - 101222993 on Build GRCh38	Gain	ZNHIT1 PLOD3
dgv11534n54	Chr.7:101160859 - 101238359 on Build GRCh38	Loss	ZNHIT1 VGF MOGAT3 NAT16 CLDN15 PLOD3 AP1S1
nsv607973	Chr.7:101139179 - 101230554 on Build GRCh38	Loss	ZNHIT1 SERPINE1 VGF MOGAT3 MIR4653 NAT16 PLOD3 AP1S1
nsv1018841	Chr.7:101117129 - 101225018 on Build GRCh38	Gain	ZNHIT1 SERPINE1 VGF MOGAT3 MIR4653 NAT16 PLOD3 AP1S1
esv2422376	Chr.7:101100204 - 101373190 on Build GRCh38	Duplication	LOC101927721 SERPINE1 MIR4653 NAT16 CLDN15 LOC101927746 FIS1 AP1S1 ZNHIT1 IFT22 VGF MOGAT3 COL26A1 PLOD3
esv2422326	Chr.7:101190168 - 101356850 on Build GRCh38	Duplication	LOC101927721 ZNHIT1 IFT22 MOGAT3 CLDN15 LOC101927746 PLOD3 FIS1
nsv1030604	Chr.7:101074451 - 101580185 on Build GRCh38	Gain	LOC101927721 SERPINE1 LINC01007 MIR4653 TRIM56 NAT16 CLDN15 LOC101927746 FIS1 AP1S1 ZNHIT1 IFT22 VGF MOGAT3 COL26A1 PLOD3
nsv607978	Chr.7:101217932 - 101328323 on Build GRCh38	Loss	LOC101927721 ZNHIT1 IFT22 CLDN15 LOC101927746 FIS1
esv2752134	Chr.7:101156850 - 101498586 on Build GRCh38	Gain	LOC101927721 MIR4653 NAT16 CLDN15 LOC101927746 FIS1 AP1S1 ZNHIT1 IFT22 VGF MOGAT3 COL26A1 PLOD3
esv2734888	Chr.7:99975623 - 101290285 on Build GRCh38	Deletion	AZGP1 UFSP1 GIGYF1 TRIM56 MIR4658 ZCWPW1 PILRB C7orf61 PPP1R35 FIS1 LOC105375429 NYAP1 AZGP1P1 CNPY4 ZNHIT1 POP7 STAG3L5P-PVRIG2P-PILRB MIR106B EPHB4 PCOLCE-AS1 AP4M1 AGFG2 TAF6 MIR25 STAG3 SERPINE1 MIR6875 GATS PVRIG2P SRRT CLDN15 ZNF3 EPO STAG3L5P PVRIG LAMTOR4 VGF ZASP MOGAT3 MUC12 SAP25 TSC22D4 COPS6 SLC12A9 PCOLCE MBLAC1 ACTL6B GAL3ST4 MIR4653 NAT16 MIR6840 MEPCE GPC2 FBXO24 ZKSCAN1 ZSCAN21 AP1S1 SPDYE3 MOSPD3 GNB2 MIR93 C7orf43 MCM7 TRIP6 ACHE TFR2 PILRA MUC17 LRCH4 PMS2P1 ZAN LOC102724094 PLOD3 MUC3A
nsv831075	Chr.7:101049016 - 101273737 on Build GRCh38	Loss	ZNHIT1 SERPINE1 VGF MOGAT3 MIR4653 TRIM56 NAT16 MUC17 CLDN15 PLOD3 FIS1 AP1S1
nsv607974	Chr.7:101149529 - 101328323 on Build GRCh38	Loss	LOC101927721 ZNHIT1 IFT22 VGF MOGAT3 MIR4653 NAT16 CLDN15 LOC101927746 PLOD3 FIS1 AP1S1
esv3614319	Chr.7:101206795 - 101265542 on Build GRCh38	Gain	ZNHIT1 CLDN15 PLOD3 FIS1
nsv831076	Chr.7:101185566 - 101368393 on Build GRCh38	Loss	LOC101927721 ZNHIT1 IFT22 MOGAT3 COL26A1 CLDN15 LOC101927746 PLOD3 FIS1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

regulation of histone deacetylation
histone exchange

Function(s)

protein binding
nucleosome binding
histone deacetylase binding
metal ion binding