Hs03628033_cn

• Gene Symbol: ZKSCAN1
• Assay Reference Genome Location: Chr.7:100038514 on build GRCh38
• Cytoband: 7q22.1

Target Gene Details

• Entrez Gene ID: 7586
• Gene Name: zinc finger with KRAB and SCAN domains 1
• Gene Aliases: 9130423L19Rik, KOX18, PHZ-37, ZNF139, ZNF36, ZSCAN33
• Location: Chr.7:100015572-100045523 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZKSCAN1	NM_001287054.1	8	6281	NP_001273983.1
	NM_001287055.1	4	5584	NP_001273984.1
	NM_003439.2	6	6252	NP_003430.1
	XM_005250565.4			XP_005250622.1
	AK090495.1	1	1543
	BX640646.1			CAE45792.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv469687	Chr.7:99974920 - 100157518 on Build GRCh38	Loss	MIR25 AZGP1 MIR4658 C7orf43 LAMTOR4 AP4M1 ZKSCAN1 CNPY4 MIR106B COPS6 ZNF3 MCM7 ZSCAN21 TAF6 MIR93 MBLAC1 AZGP1P1
esv2734888	Chr.7:99975623 - 101290285 on Build GRCh38	Deletion	SRRT PPP1R35 AZGP1 C7orf43 ZNHIT1 LOC105375429 MUC17 ZKSCAN1 EPO MOSPD3 ACHE MIR6840 GPC2 MIR93 UFSP1 LOC102724094 CLDN15 SERPINE1 LRCH4 ZAN VGF PVRIG2P TFR2 PCOLCE GIGYF1 CNPY4 FIS1 MOGAT3 MUC3A NAT16 AZGP1P1 GAL3ST4 PILRB MIR6875 SLC12A9 NYAP1 AGFG2 MEPCE TRIP6 STAG3L5P-PVRIG2P-PILRB LAMTOR4 MUC12 PMS2P1 STAG3L5P TSC22D4 PVRIG SPDYE3 ZASP C7orf61 PILRA POP7 MIR4653 MIR106B COPS6 ZNF3 ZSCAN21 TAF6 MBLAC1 AP1S1 STAG3 MIR25 MIR4658 FBXO24 EPHB4 SAP25 PLOD3 GATS ZCWPW1 TRIM56 AP4M1 PCOLCE-AS1 GNB2 ACTL6B MCM7

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated

Function(s)

transcription factor activity, sequence-specific DNA binding
protein binding
sequence-specific DNA binding
metal ion binding