Hs03675780_cn

• Gene Symbol: SLC45A4
• Assay Reference Genome Location: Chr.8:141213695 on build GRCh38
• Cytoband: 8q24.3

Target Gene Details

• Entrez Gene ID: 57210
• Gene Name: solute carrier family 45 member 4
• Gene Aliases: -
• Location: Chr.8:141207166-141308321 on Build GRCh38
• Assay Gene Location: Within Intron 15

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC45A4	NM_001080431.2			NP_001073900.1
	NM_001286646.1			NP_001273575.1
	NM_001286648.1			NP_001273577.1
	XM_011517169.2			XP_011515471.1
	XM_011517170.2			XP_011515472.1
	XM_011517171.2			XP_011515473.1
	XM_011517172.2			XP_011515474.1
	XM_011517173.2			XP_011515475.1
	XM_011517174.2			XP_011515476.1
	XM_011517176.2			XP_011515478.1
	XM_011517177.2			XP_011515479.1
	XM_011517178.2			XP_011515480.1
	XM_011517179.2			XP_011515481.1
	XM_017013648.1			XP_016869137.1
	XM_017013649.1			XP_016869138.1
	XM_017013650.1			XP_016869139.1
	AB032952.1			BAA86440.1
	AK128212.1			BAC87328.1
	BC090891.1			AAH90891.1
	BC157840.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv6428	Chr.8:141211968 - 141245531 on Build GRCh38	Insertion	SLC45A4
nsv470239	Chr.8:141182470 - 141231139 on Build GRCh38	Loss	DENND3 SLC45A4
esv2737756	Chr.8:140419230 - 141917755 on Build GRCh38	Deletion	FP248 MIR151A AGO2 LINC01300 DENND3 MIR1302-7 SLC45A4 LOC105375787 LOC107986982 MROH5 PTP4A3 PTK2 GPR20 TRAPPC9 CHRAC1
nsv1019363	Chr.8:141195805 - 141236451 on Build GRCh38	Gain	SLC45A4
nsv612568	Chr.8:140534649 - 141326581 on Build GRCh38	Gain	LOC105375787 MIR151A AGO2 LOC107986982 DENND3 PTK2 SLC45A4
nsv612573	Chr.8:141212346 - 141252228 on Build GRCh38	Gain	SLC45A4
nsv516666	Chr.8:141209711 - 141231139 on Build GRCh38	Loss	SLC45A4
nsv831483	Chr.8:141123462 - 141290370 on Build GRCh38	Gain	LOC105375787 DENND3 SLC45A4
nsv949995	Chr.8:141211502 - 141233101 on Build GRCh38	Deletion	SLC45A4
nsv1126125	Chr.8:140419236 - 141917668 on Build GRCh38	Deletion	FP248 MIR151A AGO2 LINC01300 DENND3 MIR1302-7 SLC45A4 LOC105375787 LOC107986982 MROH5 PTP4A3 PTK2 GPR20 TRAPPC9 CHRAC1

More Information

Additional Information:

For this assay, SNP(s) [rs75010825] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

secondary carrier transporter

Gene Ontology Categories:

Process(es)

sucrose transport

Function(s)

sucrose:proton symporter activity