Hs03687601_cn

• Gene Symbol: SPATC1
• Assay Reference Genome Location: Chr.8:144043924 on build GRCh38
• Cytoband: 8q24.3

Target Gene Details

• Entrez Gene ID: 375686
• Gene Name: spermatogenesis and centriole associated 1
• Gene Aliases: SPATA15
• Location: Chr.8:144010992-144047114 on Build GRCh38
• Assay Gene Location: Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPATC1	NM_001134374.1			NP_001127846.1
	NM_198572.2			NP_940974.2
	XM_011517021.1			XP_011515323.1
	XM_011517022.2			XP_011515324.1
	XM_011517023.2			XP_011515325.1
	XM_011517024.2			XP_011515326.1
	XM_011517025.2			XP_011515327.1
	XM_017013399.1			XP_016868888.1
	AB092352.1			BAD08232.1
	AK301710.1
	BC050390.1			AAH50390.1
	BC053547.1			AAH53547.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv612915	Chr.8:144007080 - 144224185 on Build GRCh38	Loss	MAF1 SHARPIN GPAA1 SPATC1 MIR6846 HGH1 OPLAH MIR6847 MROH1 SMPD5 CYC1 WDR97 EXOSC4
nsv470249	Chr.8:143889098 - 144519234 on Build GRCh38	Loss	PPP1R16A SLC52A2 MIR661 MFSD3 FBXL6 MIR6893 PARP10 PLEC TONSL-AS1 MAF1 SHARPIN GPAA1 ADCK5 SPATC1 FOXH1 SCX CYHR1 LOC101928953 HGH1 SCRT1 DGAT1 HSF1 WDR97 RECQL4 TMEM249 GRINA BOP1 SLC39A4 CPSF1 MIR939 LOC101928902 MIR6848 GPT MIR7112 KIFC2 MIR6846 VPS28 OPLAH MIR6847 MIR6849 MROH1 LRRC14 MIR1234 SMPD5 CYC1 TONSL EXOSC4
nsv6446	Chr.8:144012529 - 144050050 on Build GRCh38	Insertion	SMPD5 SPATC1
nsv515809	Chr.8:143904439 - 144519234 on Build GRCh38	Gain+Loss	PPP1R16A SLC52A2 MIR661 MFSD3 FBXL6 MIR6893 PARP10 PLEC TONSL-AS1 MAF1 SHARPIN GPAA1 ADCK5 SPATC1 FOXH1 SCX CYHR1 LOC101928953 HGH1 SCRT1 DGAT1 HSF1 WDR97 RECQL4 TMEM249 GRINA BOP1 SLC39A4 CPSF1 MIR939 LOC101928902 MIR6848 GPT MIR7112 KIFC2 MIR6846 VPS28 OPLAH MIR6847 MIR6849 MROH1 LRRC14 MIR1234 SMPD5 CYC1 TONSL EXOSC4
nsv612914	Chr.8:143972494 - 144120626 on Build GRCh38	Loss	PARP10 PLEC MAF1 SHARPIN GPAA1 SPATC1 MIR6846 OPLAH MIR6847 SMPD5 CYC1 WDR97 GRINA EXOSC4
dgv12431n54	Chr.8:143845100 - 144161320 on Build GRCh38	Loss	MIR661 PARP10 PLEC MAF1 SHARPIN GPAA1 SPATC1 MIR6846 HGH1 OPLAH MIR6847 MROH1 SMPD5 CYC1 EPPK1 WDR97 GRINA EXOSC4
nsv950015	Chr.8:143866633 - 144125597 on Build GRCh38	Deletion	MIR661 PARP10 PLEC MAF1 SHARPIN GPAA1 SPATC1 MIR6846 OPLAH MIR6847 SMPD5 CYC1 EPPK1 WDR97 GRINA EXOSC4
nsv1161815	Chr.8:143775169 - 144080674 on Build GRCh38	Deletion	MIR6845 MIR661 SCRIB PARP10 MIR937 PLEC SPATC1 MIR6846 PUF60 OPLAH MIR6847 NRBP2 LOC642574 SMPD5 EPPK1 GRINA EXOSC4
nsv428208	Chr.8:144041826 - 144722291 on Build GRCh38	Gain	PPP1R16A SLC52A2 ZNF251 MFSD3 FBXL6 MIR6893 TONSL-AS1 MAF1 SHARPIN GPAA1 ADCK5 SPATC1 FOXH1 SCX CYHR1 LOC101928953 HGH1 SCRT1 C8orf82 DGAT1 HSF1 WDR97 RECQL4 TMEM249 BOP1 SLC39A4 CPSF1 MIR939 LOC101928902 MIR6848 GPT MIR7112 KIFC2 MIR6846 VPS28 LRRC24 OPLAH MIR6847 MIR6849 MROH1 ARHGAP39 LRRC14 MIR1234 SMPD5 CYC1 TONSL EXOSC4
nsv470250	Chr.8:143917934 - 144097007 on Build GRCh38	Gain	MIR661 OPLAH MIR6847 PARP10 PLEC GPAA1 SMPD5 CYC1 SPATC1 GRINA MIR6846 EXOSC4
dgv12433n54	Chr.8:143902404 - 144120626 on Build GRCh38	Gain	MIR661 PARP10 PLEC MAF1 SHARPIN GPAA1 SPATC1 MIR6846 OPLAH MIR6847 SMPD5 CYC1 WDR97 GRINA EXOSC4
nsv612906	Chr.8:143917935 - 144090784 on Build GRCh38	Loss	MIR661 OPLAH MIR6847 PARP10 PLEC GPAA1 SMPD5 SPATC1 GRINA MIR6846 EXOSC4

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation