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See other SPATC1 CNV Assays ›
Gene Symbol
SPATC1
Assay Reference Genome
Location

Chr.8:144039304 on build GRCh38
Cytoband
8q24.3
Assay ID Hs03693336_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 375686

Gene Name:

 spermatogenesis and centriole associated 1

Gene Aliases:

 SPATA15

Location:

 Chr.8:144010992-144047114 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATC1 NM_001134374.1 NP_001127846.1
NM_198572.2 NP_940974.2
XM_011517021.1 XP_011515323.1
XM_011517022.2 XP_011515324.1
XM_011517023.2 XP_011515325.1
XM_011517024.2 XP_011515326.1
XM_011517025.2 XP_011515327.1
XM_017013399.1 XP_016868888.1
AB092352.1 BAD08232.1
AK301710.1
BC050390.1 AAH50390.1
BC053547.1 AAH53547.1
DB052198.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv612915 Chr.8:144007080 - 144224185 on Build GRCh38 Loss MIR6846 GPAA1 SPATC1 EXOSC4 OPLAH WDR97 MIR6847 HGH1 MAF1 CYC1 MROH1 SHARPIN SMPD5
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss GPAA1 SPATC1 CPSF1 MIR1234 MIR939 TMEM249 LOC101928953 MIR6893 SCX DGAT1 MIR6847 KIFC2 GPT LOC101928902 TONSL-AS1 HGH1 MAF1 CYC1 MIR6848 MROH1 TONSL BOP1 LRRC14 SHARPIN PLEC FOXH1 SLC52A2 MIR6846 MIR7112 MFSD3 RECQL4 EXOSC4 OPLAH MIR661 WDR97 FBXL6 CYHR1 ADCK5 PPP1R16A SCRT1 PARP10 SLC39A4 HSF1 GRINA SMPD5 VPS28 MIR6849
nsv6446 Chr.8:144012529 - 144050050 on Build GRCh38 Insertion SPATC1 SMPD5
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss GPAA1 SPATC1 CPSF1 MIR1234 MIR939 TMEM249 LOC101928953 MIR6893 SCX DGAT1 MIR6847 KIFC2 GPT LOC101928902 TONSL-AS1 HGH1 MAF1 CYC1 MIR6848 MROH1 TONSL BOP1 LRRC14 SHARPIN PLEC FOXH1 SLC52A2 MIR6846 MIR7112 MFSD3 RECQL4 EXOSC4 OPLAH MIR661 WDR97 FBXL6 CYHR1 ADCK5 PPP1R16A SCRT1 PARP10 SLC39A4 HSF1 GRINA SMPD5 VPS28 MIR6849
nsv612914 Chr.8:143972494 - 144120626 on Build GRCh38 Loss MIR6846 GPAA1 SPATC1 EXOSC4 OPLAH WDR97 MIR6847 MAF1 CYC1 SHARPIN PLEC PARP10 GRINA SMPD5
dgv12431n54 Chr.8:143845100 - 144161320 on Build GRCh38 Loss MIR6846 GPAA1 SPATC1 EXOSC4 OPLAH MIR661 WDR97 MIR6847 HGH1 MAF1 CYC1 MROH1 SHARPIN PLEC PARP10 EPPK1 GRINA SMPD5
nsv950015 Chr.8:143866633 - 144125597 on Build GRCh38 Deletion MIR6846 GPAA1 SPATC1 EXOSC4 OPLAH MIR661 WDR97 MIR6847 MAF1 CYC1 SHARPIN PLEC PARP10 EPPK1 GRINA SMPD5
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion MIR937 MIR6846 NRBP2 LOC642574 SPATC1 EXOSC4 OPLAH MIR661 PUF60 MIR6847 PLEC PARP10 EPPK1 GRINA MIR6845 SMPD5 SCRIB
nsv470250 Chr.8:143917934 - 144097007 on Build GRCh38 Gain MIR6846 MIR6847 GPAA1 SPATC1 EXOSC4 CYC1 OPLAH PLEC MIR661 PARP10 GRINA SMPD5
dgv12433n54 Chr.8:143902404 - 144120626 on Build GRCh38 Gain MIR6846 GPAA1 SPATC1 EXOSC4 OPLAH MIR661 WDR97 MIR6847 MAF1 CYC1 SHARPIN PLEC PARP10 GRINA SMPD5
nsv612906 Chr.8:143917935 - 144090784 on Build GRCh38 Loss MIR6846 MIR6847 GPAA1 SPATC1 EXOSC4 OPLAH PLEC MIR661 PARP10 GRINA SMPD5

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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