Hs03693852_cn

• Gene Symbol: CYHR1
• Assay Reference Genome Location: Chr.8:144460043 on build GRCh38
• Cytoband: 8q24.3

Target Gene Details

• Entrez Gene ID: 50626
• Gene Name: cysteine and histidine rich 1
• Gene Aliases: CHRP
• Location: Chr.8:144449582-144465692 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CYHR1	NM_138496.1			NP_612505.1
	XM_006716562.3			XP_006716625.2
	XM_017013463.1			XP_016868952.1
	XM_017013464.1			XP_016868953.1
	XM_017013465.1			XP_016868954.1
	XM_017013466.1			XP_016868955.1
	AK094514.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv907n27	Chr.8:144416180 - 144525122 on Build GRCh38	Loss	LOC101928953 LRRC24 MIR6893 TONSL SLC39A4 LRRC14 FOXH1 RECQL4 KIFC2 CYHR1 VPS28 GPT MFSD3 TONSL-AS1 PPP1R16A
dgv12434n54	Chr.8:144270080 - 144516801 on Build GRCh38	Loss	MIR6849 DGAT1 LOC101928953 SCRT1 MIR6893 CPSF1 MIR1234 SLC39A4 LOC101928902 CYHR1 HSF1 FBXL6 ADCK5 SLC52A2 MIR6848 TONSL BOP1 FOXH1 RECQL4 KIFC2 VPS28 GPT MIR939 MFSD3 TONSL-AS1 TMEM249 PPP1R16A
nsv470249	Chr.8:143889098 - 144519234 on Build GRCh38	Loss	MIR6849 DGAT1 LOC101928953 SPATC1 SCX PLEC SCRT1 WDR97 MIR6893 CPSF1 EXOSC4 MROH1 MIR1234 MIR6846 SLC39A4 LRRC14 MIR6847 LOC101928902 CYHR1 PARP10 SHARPIN HSF1 FBXL6 ADCK5 GRINA SLC52A2 MAF1 MIR6848 HGH1 TONSL BOP1 GPAA1 FOXH1 MIR661 RECQL4 KIFC2 VPS28 GPT MIR7112 MIR939 MFSD3 TONSL-AS1 TMEM249 CYC1 PPP1R16A SMPD5 OPLAH
nsv831489	Chr.8:144342140 - 144544026 on Build GRCh38	Loss	MIR6849 LOC101928953 MIR6893 CPSF1 MIR1234 SLC39A4 LRRC14 ARHGAP39 C8orf82 LOC101928902 CYHR1 FBXL6 ADCK5 LRRC24 SLC52A2 TONSL FOXH1 RECQL4 KIFC2 VPS28 GPT MIR939 MFSD3 TONSL-AS1 TMEM249 PPP1R16A
esv2759652	Chr.8:144300010 - 144472295 on Build GRCh38	Gain+Loss	MIR6849 FBXL6 ADCK5 DGAT1 SLC52A2 SCRT1 MIR6893 CPSF1 MIR6848 TONSL MIR1234 SLC39A4 LOC101928902 KIFC2 CYHR1 VPS28 MIR939 TONSL-AS1 TMEM249 HSF1
nsv515809	Chr.8:143904439 - 144519234 on Build GRCh38	Gain+Loss	MIR6849 DGAT1 LOC101928953 SPATC1 SCX PLEC SCRT1 WDR97 MIR6893 CPSF1 EXOSC4 MROH1 MIR1234 MIR6846 SLC39A4 LRRC14 MIR6847 LOC101928902 CYHR1 PARP10 SHARPIN HSF1 FBXL6 ADCK5 GRINA SLC52A2 MAF1 MIR6848 HGH1 TONSL BOP1 GPAA1 FOXH1 MIR661 RECQL4 KIFC2 VPS28 GPT MIR7112 MIR939 MFSD3 TONSL-AS1 TMEM249 CYC1 PPP1R16A SMPD5 OPLAH
dgv12439n54	Chr.8:144438306 - 144525122 on Build GRCh38	Loss	LRRC14 LOC101928953 LRRC24 FOXH1 RECQL4 KIFC2 CYHR1 GPT MFSD3 TONSL-AS1 TONSL PPP1R16A
nsv612940	Chr.8:144436292 - 144613673 on Build GRCh38	Loss	LOC101928953 LRRC24 TONSL LRRC14 ARHGAP39 C8orf82 FOXH1 RECQL4 KIFC2 CYHR1 GPT MFSD3 TONSL-AS1 PPP1R16A
nsv428208	Chr.8:144041826 - 144722291 on Build GRCh38	Gain	MIR6849 DGAT1 LOC101928953 SPATC1 SCX SCRT1 WDR97 MIR6893 CPSF1 EXOSC4 MROH1 ZNF251 MIR1234 MIR6846 SLC39A4 LRRC14 ARHGAP39 MIR6847 C8orf82 LOC101928902 CYHR1 SHARPIN HSF1 FBXL6 ADCK5 LRRC24 SLC52A2 MAF1 MIR6848 HGH1 TONSL BOP1 GPAA1 FOXH1 RECQL4 KIFC2 VPS28 GPT MIR7112 MIR939 MFSD3 TONSL-AS1 TMEM249 CYC1 PPP1R16A SMPD5 OPLAH
esv29999	Chr.8:144456732 - 144525122 on Build GRCh38	Loss	LRRC14 LOC101928953 LRRC24 FOXH1 RECQL4 KIFC2 CYHR1 GPT MFSD3 PPP1R16A
esv1003467	Chr.8:144453956 - 144462543 on Build GRCh38	Deletion	CYHR1

More Information

Additional Information:

For this assay, SNP(s) [rs75393047] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding
zinc ion binding