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See other SPATC1 CNV Assays ›
Gene Symbol
SPATC1
Assay Reference Genome
Location

Chr.8:144017267 on build GRCh38
Cytoband
8q24.3
Assay ID Hs03696176_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 375686

Gene Name:

 spermatogenesis and centriole associated 1

Gene Aliases:

 SPATA15

Location:

 Chr.8:144010992-144047114 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATC1 NM_001134374.1 NP_001127846.1
NM_198572.2 NP_940974.2
XM_011517021.1 XP_011515323.1
XM_011517022.2 XP_011515324.1
XM_011517025.2 1 358 XP_011515327.1
XM_017013399.1 XP_016868888.1
AB092352.1 BAD08232.1
AK301710.1
BC050390.1 AAH50390.1
BC053547.1 AAH53547.1
DB052198.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv612915 Chr.8:144007080 - 144224185 on Build GRCh38 Loss MAF1 MIR6847 MIR6846 WDR97 GPAA1 MROH1 SMPD5 CYC1 OPLAH SHARPIN SPATC1 EXOSC4 HGH1
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss ADCK5 MAF1 VPS28 WDR97 GPAA1 PPP1R16A SLC39A4 MIR6893 MIR7112 MROH1 MIR1234 SLC52A2 LRRC14 MIR6848 CYC1 PLEC OPLAH RECQL4 PARP10 MIR939 SCRT1 SHARPIN TMEM249 FBXL6 SPATC1 EXOSC4 MIR661 KIFC2 FOXH1 MIR6847 MIR6846 TONSL MFSD3 MIR6849 DGAT1 GRINA CPSF1 LOC101928953 TONSL-AS1 SMPD5 BOP1 LOC101928902 GPT SCX HSF1 HGH1 CYHR1
nsv6446 Chr.8:144012529 - 144050050 on Build GRCh38 Insertion SMPD5 SPATC1
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss ADCK5 MAF1 VPS28 WDR97 GPAA1 PPP1R16A SLC39A4 MIR6893 MIR7112 MROH1 MIR1234 SLC52A2 LRRC14 MIR6848 CYC1 PLEC OPLAH RECQL4 PARP10 MIR939 SCRT1 SHARPIN TMEM249 FBXL6 SPATC1 EXOSC4 MIR661 KIFC2 FOXH1 MIR6847 MIR6846 TONSL MFSD3 MIR6849 DGAT1 GRINA CPSF1 LOC101928953 TONSL-AS1 SMPD5 BOP1 LOC101928902 GPT SCX HSF1 HGH1 CYHR1
nsv612914 Chr.8:143972494 - 144120626 on Build GRCh38 Loss MAF1 MIR6847 MIR6846 WDR97 GPAA1 GRINA SMPD5 CYC1 PLEC OPLAH PARP10 SHARPIN SPATC1 EXOSC4
dgv12431n54 Chr.8:143845100 - 144161320 on Build GRCh38 Loss MAF1 MIR6847 MIR6846 WDR97 GPAA1 EPPK1 GRINA MROH1 SMPD5 CYC1 PLEC OPLAH PARP10 SHARPIN SPATC1 EXOSC4 HGH1 MIR661
nsv950015 Chr.8:143866633 - 144125597 on Build GRCh38 Deletion MAF1 MIR6847 MIR6846 WDR97 GPAA1 EPPK1 GRINA SMPD5 CYC1 PLEC OPLAH PARP10 SHARPIN SPATC1 EXOSC4 MIR661
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion MIR6845 MIR6847 MIR6846 EPPK1 GRINA NRBP2 LOC642574 MIR937 SMPD5 SCRIB PLEC OPLAH PARP10 SPATC1 EXOSC4 MIR661 PUF60
nsv470250 Chr.8:143917934 - 144097007 on Build GRCh38 Gain SMPD5 MIR6847 MIR6846 CYC1 GPAA1 PLEC OPLAH PARP10 GRINA SPATC1 EXOSC4 MIR661
dgv12433n54 Chr.8:143902404 - 144120626 on Build GRCh38 Gain MAF1 MIR6847 MIR6846 WDR97 GPAA1 GRINA SMPD5 CYC1 PLEC OPLAH PARP10 SHARPIN SPATC1 EXOSC4 MIR661
nsv612906 Chr.8:143917935 - 144090784 on Build GRCh38 Loss SMPD5 MIR6847 MIR6846 GPAA1 PLEC OPLAH PARP10 GRINA SPATC1 EXOSC4 MIR661

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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