Hs03707944_cn

• Gene Symbol: NELFB
• Assay Reference Genome Location: Chr.9:137264856 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 25920
• Gene Name: negative elongation factor complex member B
• Gene Aliases: COBRA1, NELF-B
• Location: Chr.9:137255300-137273548 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NELFB	NM_015456.4			NP_056271.3
	AF464935.1			AAL69965.1
	AK022651.1			BAB14157.1
	AK091056.1
	AL050280.1			CAB43381.3
	BC011892.1			AAH11892.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv13009n54	Chr.9:137173890 - 137327859 on Build GRCh38	Loss	STPG3 RNF208 TPRN FAM166A TMEM203 CYSRT1 SLC34A3 NRARP RNF224 TUBB4B TOR4A NDOR1 SSNA1 NELFB ANAPC2 EXD3 C9orf173-AS1
dgv13011n54	Chr.9:137223996 - 137338927 on Build GRCh38	Loss	STPG3 TOR4A FAM166A NELFB CYSRT1 SLC34A3 NRARP EXD3 C9orf173-AS1 RNF224 TUBB4B
nsv524322	Chr.9:136795692 - 137482216 on Build GRCh38	Loss	PTGDS SLC34A3 NRARP TRAF2 PHPT1 NOXA1 SSNA1 NELFB ANAPC2 STPG3 FAM166A TMEM203 C9orf172 GRIN1 ABCA2 TOR4A MIR7114 LRRC26 MIR4479 NSMF MIR4292 RABL6 TPRN CLIC3 MIR3621 CYSRT1 NPDC1 FBXW5 ENTPD8 NDOR1 UAP1L1 CCDC183 LOC101930307 LCN12 EXD3 DPP7 RNF208 FUT7 C9orf139 MAN1B1 RNF224 TUBB4B C9orf142 ENTPD2 PRR31 TMEM210 SAPCD2 EDF1 MAMDC4 CCDC183-AS1 LCNL1 MAN1B1-AS1 C8G PNPLA7 C9orf173-AS1
nsv951207	Chr.9:137136949 - 137379148 on Build GRCh38	Deletion	STPG3 RNF208 TPRN FAM166A MIR3621 TMEM203 CYSRT1 SLC34A3 GRIN1 NRARP RNF224 TUBB4B TOR4A NDOR1 TMEM210 SSNA1 LRRC26 NELFB ANAPC2 EXD3 C9orf173-AS1
nsv1161918	Chr.9:137118319 - 137438026 on Build GRCh38	Duplication	STPG3 RNF208 TPRN FAM166A MIR3621 TMEM203 CYSRT1 SLC34A3 GRIN1 NRARP NOXA1 RNF224 TUBB4B ENTPD8 TOR4A NDOR1 TMEM210 SSNA1 LRRC26 NELFB ANAPC2 EXD3 C9orf173-AS1
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	LINC01451 SNORA17A EGFL7 PTGDS SLC34A3 HSPC324 NRARP TRAF2 PHPT1 TMEM141 SSNA1 NELFB ANAPC2 FAM69B STPG3 FAM166A TMEM203 C9orf172 GRIN1 ABCA2 SNORA17B TOR4A LRRC26 MIR4479 SNHG7 MIR4292 RABL6 MIR6722 TPRN CLIC3 MIR3621 CYSRT1 LCN10 NPDC1 FBXW5 MIR126 NDOR1 AGPAT2 UAP1L1 CCDC183 LOC101930307 LCN12 EXD3 DPP7 RNF208 LCN8 LOC100128593 FUT7 C9orf139 LCN15 MAN1B1 RNF224 TUBB4B C9orf142 ENTPD2 PRR31 TMEM210 SAPCD2 EDF1 MAMDC4 CCDC183-AS1 LCN6 LCNL1 MAN1B1-AS1 C8G C9orf173-AS1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

transcription from RNA polymerase II promoter
transcription elongation from RNA polymerase II promoter
negative regulation of transcription elongation from RNA polymerase II promoter
positive regulation of viral transcription

Function(s)

protein binding