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See other NPDC1 CNV Assays ›
Gene Symbol
NPDC1
Assay Reference Genome
Location

Chr.9:137045629 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03708297_cn
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Assay Details

Target Gene Details

Entrez Gene ID:

 56654

Gene Name:

 neural proliferation, differentiation and control 1

Gene Aliases:

 CAB, CAB-, CAB-1, CAB1, NPDC-1

Location:

 Chr.9:137039457-137046224 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NPDC1 NM_015392.3 NP_056207.3
AF272357.1 AAF76225.1
AF285836.1 AAK27328.1
AF327349.1 AAL56010.1
AK074793.1 BAC11212.1
AK225091.1
BC004217.2 AAH04217.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss ENTPD2 LCNL1 GRIN1 MIR3621 NPDC1 LRRC26 MAN1B1 FUT7 PRR31 C9orf139 LOC101930307 C9orf142 MAN1B1-AS1 TMEM210 PTGDS ABCA2 UAP1L1 SAPCD2 DPP7 CLIC3
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss TUBB4B LCNL1 NPDC1 NDOR1 EDF1 MIR4292 FUT7 LOC101930307 RNF208 FBXW5 FAM166A C8G MAN1B1-AS1 TMEM210 STPG3 CCDC183-AS1 MAMDC4 TMEM203 NSMF TRAF2 MIR4479 C9orf139 MIR7114 C9orf142 SSNA1 NELFB CCDC183 CLIC3 SLC34A3 NRARP NOXA1 GRIN1 MAN1B1 C9orf172 PTGDS SAPCD2 LCN12 PHPT1 ENTPD2 RNF224 MIR3621 PNPLA7 TPRN LRRC26 ENTPD8 PRR31 ANAPC2 C9orf173-AS1 EXD3 RABL6 ABCA2 UAP1L1 CYSRT1 TOR4A DPP7
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion ENTPD2 LCNL1 NPDC1 MAN1B1 FUT7 PRR31 C9orf139 LOC101930307 C9orf142 C8G MAN1B1-AS1 PTGDS ABCA2 UAP1L1 SAPCD2 LCN12 DPP7 CLIC3
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss LCNL1 NPDC1 EDF1 MIR4292 FUT7 LOC101930307 FBXW5 C8G MAN1B1-AS1 TMEM210 LCN6 MIR6722 CCDC183-AS1 MAMDC4 TRAF2 LOC100128593 LCN8 CARD9 MIR4479 SNAPC4 TMEM141 C9orf139 MIR4673 C9orf142 NOTCH1 MIR126 LCN15 SDCCAG3 CCDC183 EGFL7 SNORA17A CLIC3 C9orf163 LCN10 GRIN1 HSPC324 LINC01451 MAN1B1 MIR4674 SNHG7 C9orf172 PMPCA SEC16A PTGDS SAPCD2 DNLZ LCN12 PHPT1 ENTPD2 MIR3621 SNORA17B LRRC26 PRR31 INPP5E RABL6 ABCA2 UAP1L1 FAM69B DPP7 NALT1 AGPAT2
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss ENTPD2 GRIN1 MIR3621 NPDC1 LRRC26 MAN1B1 C9orf139 LOC101930307 MAN1B1-AS1 TMEM210 UAP1L1 SAPCD2 DPP7
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain ENTPD2 GRIN1 MIR3621 NPDC1 LRRC26 MAN1B1 FUT7 ANAPC2 C9orf139 LOC101930307 SSNA1 MAN1B1-AS1 TMEM210 UAP1L1 SAPCD2 DPP7
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss ENTPD2 NPDC1 ABCA2 FUT7 C9orf139
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion TUBB4B LCNL1 NPDC1 NDOR1 EDF1 MIR4292 FUT7 LOC101930307 RNF208 FBXW5 FAM166A C8G MAN1B1-AS1 TMEM210 LCN6 MIR6722 STPG3 CCDC183-AS1 MAMDC4 TMEM203 TRAF2 LOC100128593 LCN8 MIR4479 TMEM141 C9orf139 C9orf142 SSNA1 MIR126 LCN15 NELFB CCDC183 EGFL7 SNORA17A CLIC3 SLC34A3 NRARP LCN10 GRIN1 HSPC324 LINC01451 MAN1B1 SNHG7 C9orf172 PTGDS SAPCD2 LCN12 PHPT1 ENTPD2 RNF224 MIR3621 SNORA17B TPRN LRRC26 PRR31 ANAPC2 C9orf173-AS1 EXD3 RABL6 ABCA2 UAP1L1 FAM69B CYSRT1 TOR4A DPP7 AGPAT2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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