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See other GRIN1 CNV Assays ›
Gene Symbol
GRIN1
Assay Reference Genome
Location

Chr.9:137140502 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03720952_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2902

Gene Name:

 glutamate ionotropic receptor NMDA type subunit 1

Gene Aliases:

 GluN1, MRD8, NMD-R1, NMDA1, NMDAR1, NR1

Location:

 Chr.9:137139092-137168762 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GRIN1 NM_000832.6 NP_000823.4
NM_001185090.1 NP_001172019.1
NM_001185091.1 NP_001172020.1
NM_007327.3 NP_015566.1
NM_021569.3 NP_067544.1
XM_005266071.3 XP_005266128.1
XM_005266072.3 XP_005266129.1
XM_005266073.4 XP_005266130.1
XM_011518583.2 XP_011516885.1
AB208918.1 BAD92155.1
AB208999.1 BAD92236.1
AF015730.1 AAB67723.1
AF015731.1 AAB67724.1
D13515.1 BAA02732.1
L05666.1 AAA21180.1
L13266.1 AAB59360.1
L13268.1 AAB59361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss MIR3621 LRRC26 C9orf142 LCNL1 FUT7 DPP7 C9orf139 TMEM210 LOC101930307 ENTPD2 UAP1L1 ABCA2 NPDC1 MAN1B1-AS1 PTGDS PRR31 MAN1B1 CLIC3 GRIN1 SAPCD2
nsv616007 Chr.9:137079368 - 137240666 on Build GRCh38 Loss MIR3621 LRRC26 TMEM203 DPP7 ANAPC2 SSNA1 TMEM210 RNF224 LOC101930307 TPRN CYSRT1 UAP1L1 NDOR1 MAN1B1-AS1 RNF208 MAN1B1 SLC34A3 GRIN1
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss LOC101930307 ENTPD2 UAP1L1 MAN1B1-AS1 DPP7 MAN1B1 GRIN1 SAPCD2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss NRARP FAM166A ANAPC2 TUBB4B C9orf173-AS1 CYSRT1 EDF1 C9orf172 RABL6 NDOR1 RNF208 ENTPD8 MIR4479 GRIN1 SAPCD2 LRRC26 C9orf142 DPP7 MAMDC4 MIR7114 STPG3 RNF224 UAP1L1 ABCA2 NPDC1 NOXA1 LCN12 PRR31 FBXW5 NSMF LCNL1 CCDC183-AS1 TMEM203 C8G MIR4292 FUT7 CCDC183 C9orf139 SSNA1 PNPLA7 TPRN ENTPD2 MAN1B1-AS1 TOR4A NELFB SLC34A3 MIR3621 EXD3 PHPT1 TRAF2 TMEM210 LOC101930307 PTGDS MAN1B1 CLIC3
nsv951207 Chr.9:137136949 - 137379148 on Build GRCh38 Deletion MIR3621 LRRC26 NRARP TMEM203 EXD3 FAM166A ANAPC2 SSNA1 STPG3 TUBB4B TMEM210 C9orf173-AS1 RNF224 TPRN CYSRT1 NDOR1 TOR4A RNF208 NELFB SLC34A3 GRIN1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss SEC16A SDCCAG3 TMEM141 AGPAT2 EDF1 LCN10 C9orf172 RABL6 NOTCH1 MIR4479 GRIN1 SAPCD2 LRRC26 C9orf142 DPP7 MAMDC4 MIR126 MIR6722 LOC100128593 SNORA17B UAP1L1 ABCA2 NPDC1 LCN12 PRR31 LCN8 FBXW5 MIR4674 LCNL1 SNAPC4 CCDC183-AS1 SNHG7 LINC01451 C8G MIR4292 FUT7 CCDC183 C9orf139 ENTPD2 DNLZ MAN1B1-AS1 EGFL7 LCN6 INPP5E LCN15 MIR4673 MIR3621 HSPC324 NALT1 CARD9 PHPT1 TRAF2 SNORA17A TMEM210 LOC101930307 FAM69B PTGDS C9orf163 PMPCA MAN1B1 CLIC3
nsv1161918 Chr.9:137118319 - 137438026 on Build GRCh38 Duplication MIR3621 LRRC26 NRARP TMEM203 EXD3 FAM166A ANAPC2 SSNA1 STPG3 TUBB4B TMEM210 C9orf173-AS1 RNF224 TPRN CYSRT1 NDOR1 TOR4A RNF208 ENTPD8 NOXA1 NELFB SLC34A3 GRIN1
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss MIR3621 LRRC26 DPP7 C9orf139 TMEM210 LOC101930307 ENTPD2 UAP1L1 NPDC1 MAN1B1-AS1 MAN1B1 GRIN1 SAPCD2
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain MIR3621 LRRC26 FUT7 DPP7 ANAPC2 C9orf139 SSNA1 TMEM210 LOC101930307 ENTPD2 UAP1L1 NPDC1 MAN1B1-AS1 MAN1B1 GRIN1 SAPCD2
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion NRARP FAM166A ANAPC2 TMEM141 AGPAT2 TUBB4B C9orf173-AS1 CYSRT1 EDF1 LCN10 C9orf172 RABL6 NDOR1 RNF208 MIR4479 GRIN1 SAPCD2 LRRC26 C9orf142 DPP7 MAMDC4 MIR126 STPG3 RNF224 MIR6722 LOC100128593 SNORA17B UAP1L1 ABCA2 NPDC1 LCN12 PRR31 LCN8 FBXW5 LCNL1 CCDC183-AS1 SNHG7 LINC01451 TMEM203 C8G MIR4292 FUT7 CCDC183 C9orf139 SSNA1 TPRN ENTPD2 MAN1B1-AS1 TOR4A EGFL7 LCN6 LCN15 NELFB SLC34A3 MIR3621 HSPC324 EXD3 PHPT1 TRAF2 SNORA17A TMEM210 LOC101930307 FAM69B PTGDS MAN1B1 CLIC3

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More Information


Additional Information:

For this assay, SNP(s) [rs192839656] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Function(s) Process(es)


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