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See other NPDC1 CNV Assays ›
Gene Symbol
NPDC1
Assay Reference Genome
Location

Chr.9:137041901 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03725565_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 56654

Gene Name:

 neural proliferation, differentiation and control 1

Gene Aliases:

 CAB, CAB-, CAB-1, CAB1, NPDC-1

Location:

 Chr.9:137039457-137046224 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NPDC1 NM_015392.3 NP_056207.3
AF272357.1 AAF76225.1
AF283247.1 AAF82603.1
AF285836.1 AAK27328.1
AF327349.1 AAL56010.1
AK054950.1
AK074793.1 BAC11212.1
AK225091.1
BC004217.2 AAH04217.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss MIR3621 UAP1L1 SAPCD2 PTGDS ENTPD2 TMEM210 DPP7 FUT7 ABCA2 LCNL1 LRRC26 NPDC1 MAN1B1 MAN1B1-AS1 LOC101930307 PRR31 C9orf139 CLIC3 C9orf142 GRIN1
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss MIR3621 C9orf173-AS1 MIR4292 MAMDC4 ENTPD2 EDF1 TRAF2 FUT7 STPG3 LCNL1 SLC34A3 RNF224 CCDC183 C9orf139 ENTPD8 C8G NRARP SAPCD2 PTGDS TPRN NOXA1 TUBB4B TOR4A PNPLA7 NPDC1 LCN12 LOC101930307 FBXW5 CLIC3 PHPT1 FAM166A RABL6 MIR4479 UAP1L1 EXD3 ANAPC2 NSMF TMEM210 ABCA2 TMEM203 MAN1B1 CYSRT1 MAN1B1-AS1 SSNA1 C9orf142 C9orf172 CCDC183-AS1 NDOR1 MIR7114 DPP7 RNF208 LRRC26 NELFB PRR31 GRIN1
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion C8G UAP1L1 SAPCD2 PTGDS ENTPD2 DPP7 FUT7 ABCA2 LCNL1 NPDC1 LCN12 MAN1B1 MAN1B1-AS1 LOC101930307 PRR31 C9orf139 CLIC3 C9orf142
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss MIR3621 MIR4292 SNHG7 MAMDC4 ENTPD2 EDF1 TRAF2 SNAPC4 FUT7 PMPCA SNORA17B LCNL1 NOTCH1 CCDC183 C9orf139 SNORA17A C8G C9orf163 LOC100128593 HSPC324 SAPCD2 PTGDS CARD9 NPDC1 LCN12 LOC101930307 FBXW5 MIR4673 CLIC3 MIR126 PHPT1 SDCCAG3 LCN15 RABL6 MIR4479 UAP1L1 AGPAT2 LINC01451 DNLZ TMEM210 ABCA2 LCN10 MAN1B1 LCN8 MAN1B1-AS1 C9orf142 MIR4674 C9orf172 FAM69B MIR6722 CCDC183-AS1 EGFL7 SEC16A TMEM141 DPP7 LRRC26 INPP5E PRR31 NALT1 LCN6 GRIN1
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss MIR3621 UAP1L1 SAPCD2 ENTPD2 TMEM210 DPP7 LRRC26 NPDC1 MAN1B1 MAN1B1-AS1 LOC101930307 C9orf139 GRIN1
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain MIR3621 UAP1L1 ANAPC2 SAPCD2 ENTPD2 TMEM210 DPP7 FUT7 LRRC26 NPDC1 MAN1B1 MAN1B1-AS1 LOC101930307 SSNA1 C9orf139 GRIN1
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss ABCA2 NPDC1 C9orf139 ENTPD2 FUT7
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion MIR3621 C9orf173-AS1 MIR4292 SNHG7 MAMDC4 ENTPD2 EDF1 TRAF2 FUT7 STPG3 SNORA17B LCNL1 SLC34A3 RNF224 CCDC183 C9orf139 SNORA17A C8G NRARP LOC100128593 HSPC324 SAPCD2 PTGDS TPRN TUBB4B TOR4A NPDC1 LCN12 LOC101930307 FBXW5 CLIC3 MIR126 PHPT1 FAM166A LCN15 RABL6 MIR4479 UAP1L1 EXD3 ANAPC2 AGPAT2 LINC01451 TMEM210 ABCA2 TMEM203 LCN10 MAN1B1 LCN8 CYSRT1 MAN1B1-AS1 SSNA1 C9orf142 C9orf172 FAM69B MIR6722 CCDC183-AS1 EGFL7 NDOR1 TMEM141 DPP7 RNF208 LRRC26 NELFB PRR31 LCN6 GRIN1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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