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See other NPDC1 CNV Assays ›
Gene Symbol
NPDC1
Assay Reference Genome
Location

Chr.9:137044657 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03726217_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 56654

Gene Name:

 neural proliferation, differentiation and control 1

Gene Aliases:

 CAB, CAB-, CAB-1, CAB1, NPDC-1

Location:

 Chr.9:137039457-137046224 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NPDC1 NM_015392.3 NP_056207.3
AF272357.1 AAF76225.1
AF285836.1 AAK27328.1
AF327349.1 AAL56010.1
AK074793.1 BAC11212.1
AK225091.1
BC004217.2 AAH04217.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss NPDC1 MAN1B1 PTGDS LOC101930307 UAP1L1 MAN1B1-AS1 FUT7 GRIN1 LRRC26 C9orf139 MIR3621 CLIC3 ABCA2 C9orf142 DPP7 ENTPD2 LCNL1 PRR31 TMEM210 SAPCD2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss LOC101930307 MAN1B1-AS1 FUT7 TMEM203 RNF224 NELFB SLC34A3 NRARP CLIC3 ENTPD8 ABCA2 C9orf142 ANAPC2 PHPT1 DPP7 CCDC183 PRR31 MAN1B1 UAP1L1 EXD3 TUBB4B FAM166A MIR3621 NSMF MIR7114 NDOR1 NOXA1 LCN12 SAPCD2 PNPLA7 NPDC1 STPG3 MIR4292 TRAF2 GRIN1 FBXW5 MIR4479 C8G LRRC26 C9orf139 CYSRT1 C9orf173-AS1 SSNA1 LCNL1 PTGDS C9orf172 TPRN CCDC183-AS1 MAMDC4 RNF208 TOR4A EDF1 RABL6 ENTPD2 TMEM210
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion NPDC1 MAN1B1 PTGDS LOC101930307 UAP1L1 MAN1B1-AS1 FUT7 C8G C9orf139 CLIC3 ABCA2 C9orf142 DPP7 ENTPD2 LCNL1 LCN12 PRR31 SAPCD2
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss MIR4674 LOC101930307 MAN1B1-AS1 FUT7 LOC100128593 FAM69B NALT1 SNORA17B LINC01451 CARD9 NOTCH1 CLIC3 ABCA2 C9orf142 PHPT1 LCN10 DPP7 CCDC183 PRR31 C9orf163 MIR126 MAN1B1 UAP1L1 EGFL7 MIR4673 SEC16A MIR3621 LCN6 LCN12 SAPCD2 NPDC1 MIR4292 TRAF2 SNAPC4 GRIN1 FBXW5 AGPAT2 MIR4479 C8G LRRC26 C9orf139 SNORA17A SDCCAG3 DNLZ LCNL1 MIR6722 PTGDS INPP5E SNHG7 PMPCA C9orf172 HSPC324 LCN15 CCDC183-AS1 MAMDC4 TMEM141 EDF1 LCN8 RABL6 ENTPD2 TMEM210
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss NPDC1 MAN1B1 LOC101930307 UAP1L1 MAN1B1-AS1 GRIN1 LRRC26 C9orf139 MIR3621 DPP7 ENTPD2 TMEM210 SAPCD2
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain NPDC1 MAN1B1 LOC101930307 UAP1L1 MAN1B1-AS1 FUT7 GRIN1 LRRC26 C9orf139 MIR3621 SSNA1 ANAPC2 DPP7 ENTPD2 TMEM210 SAPCD2
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss NPDC1 C9orf139 FUT7 ABCA2 ENTPD2
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion LOC101930307 MAN1B1-AS1 FUT7 LOC100128593 FAM69B TMEM203 SNORA17B RNF224 LINC01451 NELFB SLC34A3 NRARP CLIC3 ABCA2 C9orf142 ANAPC2 PHPT1 LCN10 DPP7 CCDC183 PRR31 MIR126 MAN1B1 UAP1L1 EXD3 EGFL7 TUBB4B FAM166A MIR3621 LCN6 NDOR1 LCN12 SAPCD2 NPDC1 STPG3 MIR4292 TRAF2 GRIN1 FBXW5 AGPAT2 MIR4479 C8G LRRC26 C9orf139 SNORA17A CYSRT1 C9orf173-AS1 SSNA1 LCNL1 MIR6722 PTGDS SNHG7 C9orf172 HSPC324 TPRN LCN15 CCDC183-AS1 MAMDC4 TMEM141 RNF208 TOR4A EDF1 LCN8 RABL6 ENTPD2 TMEM210

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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