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Gene Symbol
KNDC1
Assay Reference Genome
Location

Chr.10:133178439 on build GRCh38
Cytoband
10q26.3
Assay ID Hs03739689_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 85442

Gene Name:

 kinase non-catalytic C-lobe domain containing 1

Gene Aliases:

 C10orf23, RASGEF2, bB439H18.3

Location:

 Chr.10:133160096-133226412 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KNDC1 NM_152643.6 NP_689856.6
XM_017016858.1 XP_016872347.1
XM_017016859.1 XP_016872348.1
AB000781.1 BAD12625.1
AB051555.1 BAB21859.1
AI951527.1
AK090457.1 BAC03438.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv529e59 Chr.10:133176958 - 133178456 on Build GRCh38 Duplication KNDC1
esv2759793 Chr.10:133030918 - 133619181 on Build GRCh38 Gain+Loss MIR3944 MTG1 VENTX ADAM8 UTF1 SPRN ADGRA1 MIR202HG SCART1 KNDC1 SYCE1 TUBGCP2 CYP2E1 ZNF511 PAOX PRAP1 CALY SPRNP1 ADGRA1-AS1 FUOM ECHS1 MIR202
nsv1159784 Chr.10:133132423 - 133263092 on Build GRCh38 Deletion VENTX ADAM8 UTF1 MIR202HG KNDC1 MIR202
esv2760107 Chr.10:133121116 - 133286029 on Build GRCh38 Gain VENTX ADAM8 UTF1 ADGRA1 MIR202HG KNDC1 TUBGCP2 MIR202
nsv552577 Chr.10:133174792 - 133184562 on Build GRCh38 Gain KNDC1
dgv1465n54 Chr.10:133107631 - 133189333 on Build GRCh38 Loss ADGRA1 KNDC1
nsv832038 Chr.10:133143596 - 133320747 on Build GRCh38 Gain+Loss ZNF511 VENTX ADAM8 UTF1 MIR202HG KNDC1 TUBGCP2 MIR202
nsv528260 Chr.10:132859348 - 133620799 on Build GRCh38 Loss LINC01167 MTG1 ADAM8 SPRN LINC01166 SCART1 KNDC1 LINC01168 CYP2E1 ZNF511 PRAP1 SPRNP1 ADGRA1-AS1 FUOM CFAP46 ECHS1 MIR3944 VENTX UTF1 ADGRA1 MIR202HG SYCE1 TUBGCP2 PAOX CALY MIR202
nsv832036 Chr.10:133089509 - 133368232 on Build GRCh38 Loss VENTX ADAM8 UTF1 ADGRA1 MIR202HG KNDC1 TUBGCP2 ZNF511 PRAP1 CALY FUOM ECHS1 MIR202
nsv552574 Chr.10:133140872 - 133249523 on Build GRCh38 Gain VENTX UTF1 MIR202HG KNDC1 MIR202
nsv1151170 Chr.10:133176895 - 133178396 on Build GRCh38 Duplication KNDC1
nsv832039 Chr.10:133161709 - 133267664 on Build GRCh38 Loss VENTX ADAM8 UTF1 MIR202HG KNDC1 MIR202

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More Information


Additional Information:

For this assay, SNP(s) [rs76420680] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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