Hs03772427_cn

• Gene Symbol: CARD16
• Assay Reference Genome Location: Chr.11:105043816 on build GRCh38
• Cytoband: 11q22.3

Target Gene Details

• Entrez Gene ID: 114769
• Gene Name: caspase recruitment domain family member 16
• Gene Aliases: COP, COP1, PSEUDO-ICE
• Location: Chr.11:105040218-105045416 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CARD16	NM_001017534.1			NP_001017534.1
	NM_052889.2			NP_443121.1
	XM_011542583.2			XP_011540885.1
	AF367017.1			AAK71682.1
	AK125640.1	2	789
	AK311902.1
	AY885669.1			AAW78563.1
	BC117478.1			AAI17479.1
	BC117480.1			AAI17481.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv556219	Chr.11:105004534 - 105047790 on Build GRCh38	Loss	CARD16 CASP5 CASP1
nsv1052674	Chr.11:104111970 - 107043401 on Build GRCh38	Loss	CASP4 LOC102723895 LOC643733 CARD16 CARD17 LOC101928535 KBTBD3 AASDHPPT LOC105369473 CASP5 CASP1 GUCY1A2 CARD18 CASP1P2 MIR7641-1 PDGFD CASP12 GRIA4 MSANTD4
esv2750978	Chr.11:104094062 - 105475331 on Build GRCh38	Gain	CASP4 CARD18 CASP1P2 LOC102723895 MIR7641-1 LOC643733 CARD16 PDGFD CASP12 CARD17 CASP5 CASP1
nsv1046098	Chr.11:104336482 - 105132934 on Build GRCh38	Loss	CASP4 CASP1P2 LOC102723895 LOC643733 CARD16 CASP12 CARD17 CASP5 CASP1
nsv951065	Chr.11:105042274 - 105046073 on Build GRCh38	Duplication	CARD16
nsv468862	Chr.11:104903287 - 105372644 on Build GRCh38	Gain	CASP4 CARD18 CASP1P2 LOC643733 CARD16 CARD17 CASP5 CASP1
esv2759863	Chr.11:105025149 - 105108990 on Build GRCh38	Gain+Loss	CASP1P2 CARD16 CARD17 CASP1
nsv1038877	Chr.11:104166130 - 105422422 on Build GRCh38	Gain	CASP4 CARD18 CASP1P2 LOC102723895 MIR7641-1 LOC643733 CARD16 CASP12 CARD17 CASP5 CASP1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

negative regulation of endopeptidase activity
regulation of apoptotic process

Function(s)

cysteine-type endopeptidase inhibitor activity