Hs03776704_cn

• Gene Symbol: SMCO4
• Assay Reference Genome Location: Chr.11:93485421 on build GRCh38
• Cytoband: 11q21

Target Gene Details

• Entrez Gene ID: 56935
• Gene Name: single-pass membrane protein with coiled-coil domains 4
• Gene Aliases: C11orf75, FN5
• Location: Chr.11:93478472-93586856 on Build GRCh38
• Assay Gene Location: Within Intron 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SMCO4	NM_020179.2			NP_064564.1
	XM_011542907.1			XP_011541209.1
	XM_011542908.2			XP_011541210.1
	XM_011542909.1			XP_011541211.1
	XM_011542910.2			XP_011541212.1
	XM_011542911.2			XP_011541213.1
	XM_017018019.1			XP_016873508.1
	XM_017018020.1			XP_016873509.1
	AF197137.1			AAF86046.1
	BC031564.1			AAH31564.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2760208	Chr.11:93439507 - 93533428 on Build GRCh38	Loss	SMCO4
nsv1039134	Chr.11:93056834 - 93486776 on Build GRCh38	Loss	SMCO4 DEUP1 SLC36A4 LOC102723746
esv3627294	Chr.11:93485306 - 93944317 on Build GRCh38	Gain	SNORD5 SNORA40 SNORA8 CEP295 MIR1304 SMCO4 SNORA25 VSTM5 SNORA32 SNORA18 MED17 SNORA1 SCARNA9 C11orf54 SNORD6 TAF1D

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function
protein binding