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See other MCF2L CNV Assays ›
Gene Symbol
MCF2L
Assay Reference Genome
Location

Chr.13:112910089 on build GRCh38
Cytoband
13q34
Assay ID Hs03853778_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 23263

Gene Name:

 MCF.2 cell line derived transforming sequence like

Gene Aliases:

 ARHGEF14, DBS, OST

Location:

 Chr.13:112894378-113099739 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MCF2L XM_011537482.1 XP_011535784.1
XM_011537483.2 XP_011535785.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759969 Chr.13:112722543 - 113036887 on Build GRCh38 Loss MCF2L-AS1 ATP11A LOC107984590 ATP11A-AS1 MCF2L
nsv509518 Chr.13:112871364 - 112919528 on Build GRCh38 Insertion ATP11A MCF2L
nsv1047144 Chr.13:112866048 - 113073300 on Build GRCh38 Gain MCF2L-AS1 ATP11A LOC107984590 MCF2L
nsv832723 Chr.13:112848506 - 113044458 on Build GRCh38 Loss MCF2L-AS1 ATP11A LOC107984590 MCF2L
nsv1044644 Chr.13:112437023 - 113055517 on Build GRCh38 Gain TUBGCP3 MCF2L-AS1 ATP11A LOC107984590 ATP11AUN ATP11A-AS1 MCF2L

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More Information


Additional Information:

For this assay, SNP(s) [rs116233350,rs76458546] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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