Genomic Map
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Target Gene Details
Entrez Gene ID: | 400165 |
Gene Name: | ATP11A upstream neighbor |
Gene Aliases: |
C13orf35, SMABLO1 |
Location: |
Chr.13:112647044-112684497 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ATP11AUN | NM_207440.2 | NP_997323.1 | ||
| AK129953.1 | BAC85256.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv3633583 | Chr.13:112656199 - 112668144 on Build GRCh38 | Gain |
 ATP11AUN
|
| nsv563226 | Chr.13:112629877 - 112688892 on Build GRCh38 | Gain |
ATP11AUN
|
| nsv521686 | Chr.13:112656233 - 112670010 on Build GRCh38 | Gain |
ATP11AUN
|
| esv2748162 | Chr.13:112656836 - 112658019 on Build GRCh38 | Deletion |
ATP11AUN
|
| dgv3417n54 | Chr.13:112504873 - 112744470 on Build GRCh38 | Gain |
TUBGCP3
ATP11A
ATP11AUN
|
| esv28365 | Chr.13:112656038 - 112672281 on Build GRCh38 | Gain+Loss |
ATP11AUN
|
| nsv1045238 | Chr.13:112530283 - 112723969 on Build GRCh38 | Gain |
TUBGCP3
ATP11A
ATP11AUN
|
| nsv1044644 | Chr.13:112437023 - 113055517 on Build GRCh38 | Gain |
MCF2L
TUBGCP3
ATP11A-AS1
LOC107984590
ATP11A
MCF2L-AS1
ATP11AUN
|
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Additional Information:
For this assay, SNP(s) [rs115825127] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
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