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System Message

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Gene Symbol: CLK3
Assay Reference Genome Location: Chr.15:74617729 on build GRCh38
Cytoband: 15q24.1

Assay ID

Hs03893317_cn

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Catalog #	4400291
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Genomic Map
Assay Details
More Information

Assay Details

Target Gene Details

Entrez Gene ID:	1198
Gene Name:	CDC like kinase 3
Gene Aliases:	PHCLK3, PHCLK3/152
Location:	Chr.15:74598476-74645418 on Build GRCh38
Assay Gene Location:	Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CLK3	NM_001130028.1			NP_001123500.1
	NM_003992.4			NP_003983.2
	XM_005254151.3			XP_005254208.1
	XM_011521205.2			XP_011519507.1
	XM_011521206.2			XP_011519508.1
	XM_011521209.2			XP_011519511.2
	XM_017021905.1			XP_016877394.1
	XM_017021906.1			XP_016877395.1
	XM_017021907.1			XP_016877396.1
	XM_017021908.1			XP_016877397.1
	XM_017021909.1			XP_016877398.1
	XM_017021910.1			XP_016877399.1
	AK091692.1
	AK225680.1
	AK291983.1
	AK293769.1
	AK301689.1
	BC002555.2			AAH02555.1
	BC006103.1			AAH06103.1
	BC019881.1			AAH19881.1
	BI459843.1
	CR933693.1
	L29217.1			AAA61484.1
	L29220.1			AAA61483.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv457204	Chr.15:74592750 - 74655722 on Build GRCh38	Loss	EDC3 ARID3B LOC102723750 CLK3
nsv817698	Chr.15:74596822 - 74727108 on Build GRCh38	Gain	EDC3 ARID3B CYP1A1 LOC102723750 CLK3
nsv951994	Chr.15:74614960 - 74633959 on Build GRCh38	Deletion	EDC3 CLK3
nsv1121512	Chr.15:72670085 - 75273877 on Build GRCh38	Deletion	HCN4 C15orf39 REC114 CYP11A1 NPTN-IT1 RPP25 BBS4 NPTN LOXL1-AS1 CYP1A1 LOC101929333 LOC105376731 ISLR2 GOLGA6C STRA6 MPI ISLR COX5A MIR6882 ADPGK-AS1 LOC732265 CPLX3 PML MIR6881 GOLGA6A LOC102723750 C15orf59-AS1 ARID3B SCAMP2 MIR4513 FAM219B LMAN1L UBL7 CYP1A2 TBC1D21 PPCDC LOC283731 CLK3 EDC3 UBL7-AS1 LOC729739 LOC107984728 NEO1 CCDC33 ULK3 C15orf59 SCAMP5 SEMA7A LOXL1 CSK ADPGK HIGD2B CD276 STOML1

More Information

Set Membership:

Intragenic

Intronic

Non-exonic

DGV Variation

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Function(s) Process(es)

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