Hs03900053_cn

• Gene Symbol: CLK3
• Assay Reference Genome Location: Chr.15:74609396 on build GRCh38
• Cytoband: 15q24.1

Target Gene Details

• Entrez Gene ID: 1198
• Gene Name: CDC like kinase 3
• Gene Aliases: PHCLK3, PHCLK3/152
• Location: Chr.15:74598476-74645418 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CLK3	NM_003992.4			NP_003983.2
	XM_017021908.1			XP_016877397.1
	XM_017021909.1			XP_016877398.1
	XM_017021910.1			XP_016877399.1
	L29217.1			AAA61484.1
	L29220.1			AAA61483.1

Target Gene Details

• Entrez Gene ID: 102723750
• Gene Name: uncharacterized LOC102723750
• Gene Aliases: -
• Location: Chr.15:74601853-74611502 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC102723750	XM_017022789.1			XP_016878278.1
	XM_017022790.1			XP_016878279.1
	XM_017022791.1			XP_016878280.1
	XM_017022792.1			XP_016878281.1
	XM_017022793.1			XP_016878282.1
	XM_017022794.1			XP_016878283.1
	XM_017022795.1			XP_016878284.1
	XM_017022796.1			XP_016878285.1
	XM_017022797.1	1	901	XP_016878286.1
	XM_017022798.1			XP_016878287.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv457204	Chr.15:74592750 - 74655722 on Build GRCh38	Loss	ARID3B EDC3 CLK3 LOC102723750
nsv817698	Chr.15:74596822 - 74727108 on Build GRCh38	Gain	ARID3B CYP1A1 EDC3 CLK3 LOC102723750
nsv1121512	Chr.15:72670085 - 75273877 on Build GRCh38	Deletion	GOLGA6C SCAMP2 STOML1 ARID3B MPI NEO1 LMAN1L ULK3 NPTN LOC105376731 MIR4513 C15orf59 SEMA7A CPLX3 CCDC33 RPP25 CLK3 LOC729739 UBL7 STRA6 SCAMP5 NPTN-IT1 HIGD2B CYP11A1 LOXL1-AS1 EDC3 MIR6882 LOC107984728 ISLR2 ADPGK ISLR BBS4 LOXL1 CYP1A1 CSK MIR6881 C15orf59-AS1 LOC102723750 PPCDC C15orf39 PML LOC732265 CYP1A2 GOLGA6A TBC1D21 UBL7-AS1 REC114 LOC101929333 FAM219B COX5A HCN4 LOC283731 ADPGK-AS1 CD276

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Process(es)

protein phosphorylation
peptidyl-tyrosine phosphorylation
regulation of RNA splicing
protein autophosphorylation

Function(s)

protein serine/threonine kinase activity
protein serine/threonine/tyrosine kinase activity
protein tyrosine kinase activity
protein binding
ATP binding
poly(A) RNA binding