Hs03913687_cn

• Gene Symbol: CGNL1
• Assay Reference Genome Location: Chr.15:57388274 on build GRCh38
• Cytoband: 15q21.3

Target Gene Details

• Entrez Gene ID: 84952
• Gene Name: cingulin like 1
• Gene Aliases: JACOP, PCING
• Location: Chr.15:57376487-57550727 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CGNL1	NM_001252335.1			NP_001239264.1
	NM_032866.4			NP_116255.2
	XM_005254726.3			XP_005254783.1
	XM_011522120.1			XP_011520422.1
	XM_011522121.1			XP_011520423.1
	AK056673.1			BAB71249.1
	AK307410.1
	AY274808.1			AAP42073.1
	AY610514.1			AAT37906.1
	BC030995.1
	DA272287.1
	DC415862.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv4556n54	Chr.15:57330402 - 57498238 on Build GRCh38	Gain	CGNL1
nsv1045611	Chr.15:57058767 - 57778609 on Build GRCh38	Gain	MYZAP CGNL1 LINC00926 GCOM1 TCF12 POLR2M LINC01413
nsv833022	Chr.15:57365214 - 57537914 on Build GRCh38	Gain	CGNL1
esv3636609	Chr.15:57350452 - 57488224 on Build GRCh38	Gain	CGNL1
esv3636608	Chr.15:57350435 - 57426987 on Build GRCh38	Gain	CGNL1
nsv457166	Chr.15:57352069 - 57483628 on Build GRCh38	Gain	CGNL1
dgv2607n100	Chr.15:57340817 - 57494394 on Build GRCh38	Gain	CGNL1
esv2751536	Chr.15:57335210 - 57496210 on Build GRCh38	Gain	CGNL1
esv2761873	Chr.15:57351455 - 57486837 on Build GRCh38	Gain	CGNL1
nsv833021	Chr.15:57203215 - 57459168 on Build GRCh38	Gain	CGNL1 LINC00926 TCF12 LINC01413
nsv1054547	Chr.15:57308290 - 57685461 on Build GRCh38	Gain	MYZAP CGNL1 GCOM1 LINC01413

More Information

Additional Information:

For this assay, SNP(s) [rs139851092] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

motor activity