Hs03919017_cn

• Gene Symbol: TPSG1
• Assay Reference Genome Location: Chr.16:1225423 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 25823
• Gene Name: tryptase gamma 1
• Gene Aliases: PRSS31, TMT, trpA
• Location: Chr.16:1221651-1226454 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TPSG1	XM_011522447.2			XP_011520749.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	LOC107984876 UNKL EME2 AXIN1 MIR3677 LMF1 TBC1D24 ECI1 HAGHL FAHD1 LOC105371184 METTL26 MRPS34 IFT140 LOC101929280 TSC2 CHTF18 SNORD60 CACNA1H METRN NPW C1QTNF8 TMEM8A RHBDF1 HBM WDR24 PRR35 C16orf59 FBXL16 PGP RAB11FIP3 WASIR2 MIR4717 SNHG19 TPSD1 CCNF HBA2 RPUSD1 PIGQ SSTR5 PTX4 MIR3177 FAM234A HS3ST6 SYNGR3 TMEM204 MIR6768 GNG13 IGFALS CCDC78 MSRB1 HAGH LOC107987233 MLST8 MPG SNHG9 BRICD5 SSTR5-AS1 MSLN JMJD8 WDR90 SLC9A3R2 SNORA78 SPSB3 PRSS27 SNORA10 TBL3 MIR1225 SNORA64 NPRL3 NTN3 POLR3K ABCA3 LOC100287175 GFER MIR5587 MIR4516 MIR3178 SOX8 MIR6767 WFIKKN1 CRAMP1 FLJ42627 DNASE1L2 MIR3180-5 NTHL1 LMF1-AS1 MIR6859-4 PDPK1 CEMP1 RHBDL1 ARHGDIG C16orf91 ATP6V0C NUBP2 LOC105371038 RPL3L TPSB2 TRAF7 NARFL KCTD5 CCDC154 LOC105371049 DECR2 HN1L RGS11 ERVK13-1 PRR25 TSR3 HBQ1 PDIA2 AMDHD2 RAB26 LINC00254 PRSS29P TPSG1 RNF151 NOXO1 RPS2 LOC105371047 RHOT2 DDX11L10 MIR6511B1 MEIOB LUC7L MAPK8IP3 CAPN15 STUB1 ZNF598 CASKIN1 ABCA17P NME3 TELO2 MIR662 LOC652276 UBE2I FAM173A MRPL28 LOC100134368 HBA1 MCRIP2 RPL23AP5 E4F1 NME4 LOC105371045 TPSAB1 MIR940 HBZ GNPTG LOC729652 BAIAP3 MIR3176 LOC105371046 NDUFB10 NHLRC4 RAB40C LINC00235 PKD1 CLCN7 LOC106660606 SNRNP25 RNPS1
nsv571109	Chr.16:1205545 - 1287716 on Build GRCh38	Gain	TPSD1 CACNA1H PRSS29P TPSB2 TPSG1 TPSAB1
nsv428316	Chr.16:929650 - 1363252 on Build GRCh38	Gain+Loss	UNKL SOX8 SSTR5 CACNA1H C1QTNF8 LMF1 TPSAB1 LMF1-AS1 GNPTG TSR3 BAIAP3 TPSD1 UBE2I PRSS29P TPSB2 TPSG1 SSTR5-AS1
nsv1051302	Chr.16:1162523 - 1299208 on Build GRCh38	Gain	TPSD1 CACNA1H PRSS29P TPSB2 TPSG1 TPSAB1
nsv1046885	Chr.16:1063695 - 1299208 on Build GRCh38	Gain	SSTR5 TPSD1 CACNA1H PRSS29P C1QTNF8 TPSB2 TPSG1 TPSAB1 SSTR5-AS1
nsv833117	Chr.16:1217597 - 1318867 on Build GRCh38	Loss	TPSD1 CACNA1H UBE2I PRSS29P TPSB2 TPSG1 TPSAB1
nsv571101	Chr.16:1078406 - 1287716 on Build GRCh38	Gain	SSTR5 TPSD1 CACNA1H PRSS29P C1QTNF8 TPSB2 TPSG1 TPSAB1 SSTR5-AS1
nsv571108	Chr.16:1202441 - 1283386 on Build GRCh38	Loss	TPSD1 CACNA1H PRSS29P TPSB2 TPSG1 TPSAB1
nsv471066	Chr.16:893361 - 1482836 on Build GRCh38	Loss	LOC107984876 UNKL SOX8 SSTR5 CCDC154 CACNA1H C1QTNF8 LMF1 LOC105371045 TPSAB1 LMF1-AS1 GNPTG TSR3 BAIAP3 C16orf91 TPSD1 UBE2I PRSS29P TPSB2 TPSG1 CLCN7 SSTR5-AS1
dgv2691n100	Chr.16:1002943 - 1247707 on Build GRCh38	Gain	SSTR5 CACNA1H C1QTNF8 TPSB2 TPSG1 TPSAB1 SSTR5-AS1
nsv952899	Chr.16:1142501 - 1535899 on Build GRCh38	Deletion	UNKL LOC105371047 CCDC154 PTX4 CACNA1H TMEM204 LOC105371045 TPSAB1 GNPTG TSR3 BAIAP3 C16orf91 TPSD1 TELO2 UBE2I PRSS29P IFT140 TPSB2 TPSG1 CLCN7
nsv571105	Chr.16:1148938 - 1263381 on Build GRCh38	Loss	TPSD1 CACNA1H PRSS29P TPSB2 TPSG1 TPSAB1
nsv571102	Chr.16:1084818 - 1257675 on Build GRCh38	Loss	TPSD1 CACNA1H C1QTNF8 TPSB2 TPSG1 TPSAB1

More Information

Additional Information:

For this assay, SNP(s) [rs113262345] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Process(es)

proteolysis

Function(s)

serine-type endopeptidase activity
serine-type peptidase activity