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See other LMF1 CNV Assays ›
Gene Symbol
LMF1
Assay Reference Genome
Location

Chr.16:868009 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03920523_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 64788

Gene Name:

 lipase maturation factor 1

Gene Aliases:

 C16orf26, HMFN1876, JFP11, TMEM112, TMEM112A

Location:

 Chr.16:853632-981615 on Build GRCh38

Assay Gene Location:

 Within Exon 21
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1 NM_022773.2 NP_073610.2
NR_033645.1
NR_033646.1
XM_006720928.2 XP_006720991.1
XM_006720929.3 XP_006720992.1
XM_011522617.2 XP_011520919.1
XM_017023575.1 11 1620 XP_016879064.1
XM_017023576.1 XP_016879065.1
XM_017023577.1 XP_016879066.1
XM_017023578.1 XP_016879067.1
XM_017023579.1 XP_016879068.1
XM_017023580.1 XP_016879069.1
AB075873.1 BAD38655.1
AK022743.1 BAB14218.1
AK025955.1 BAB15295.1
AK093050.1
AK125201.1
AK225065.1
AK225406.1
AL832177.1
BC010738.1 AAH10738.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571046 Chr.16:828324 - 1202441 on Build GRCh38 Gain SSTR5 SSTR5-AS1 LMF1 SOX8 LMF1-AS1 C1QTNF8 CACNA1H LOC107984876
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LINC00235 SSTR5-AS1 WASIR2 RPL23AP5 C16orf59 CACNA1H MIR3176 UBE2I NDUFB10 IGFALS TPSD1 LUC7L GFER TBC1D24 CCDC78 ERVK13-1 HBZ E4F1 HBQ1 SYNGR3 LINC00254 METRN IFT140 ABCA3 DNASE1L2 HBA1 MIR3177 SLC9A3R2 PDIA2 LOC105371038 SNRNP25 PIGQ CLCN7 SPSB3 NOXO1 PGP SNORA78 RNPS1 PRSS27 MRPL28 TMEM204 PTX4 POLR3K EME2 CASKIN1 GNG13 CHTF18 LOC729652 CAPN15 LOC107987233 MRPS34 C16orf91 MPG RGS11 MIR3677 MAPK8IP3 WDR24 TSR3 ECI1 LOC652276 PRSS29P RHOT2 MSLN MIR4717 MLST8 LOC101929280 SSTR5 PKD1 RHBDF1 MIR6511B1 HN1L BAIAP3 LOC100287175 WDR90 MIR3180-5 LOC105371045 NHLRC4 METTL26 TSC2 NME3 TPSB2 MIR4516 KCTD5 ARHGDIG FBXL16 MEIOB RPS2 MIR5587 TPSG1 HBA2 STUB1 LMF1 JMJD8 MIR6767 MIR662 SNHG19 TBL3 LMF1-AS1 MIR6768 LOC100134368 NTHL1 HAGH TPSAB1 SNORA10 NARFL ZNF598 MCRIP2 WFIKKN1 LOC105371184 AXIN1 NPW LOC105371047 TRAF7 PRR25 PRR35 DDX11L10 MIR1225 HAGHL RHBDL1 RAB40C FAM234A LOC106660606 HBM LOC107984876 DECR2 FAHD1 ABCA17P NUBP2 SNORD60 MIR940 SNORA64 PDPK1 AMDHD2 FAM173A TELO2 RAB26 CCNF CCDC154 UNKL RAB11FIP3 RPL3L LOC105371049 HS3ST6 RPUSD1 NTN3 RNF151 SOX8 C1QTNF8 NME4 MIR6859-4 ATP6V0C NPRL3 TMEM8A CRAMP1 CEMP1 MSRB1 LOC105371046 SNHG9 GNPTG BRICD5 MIR3178 FLJ42627
esv3637586 Chr.16:798995 - 892120 on Build GRCh38 Loss LMF1 PRR25 GNG13
esv3637595 Chr.16:859147 - 890552 on Build GRCh38 Loss LMF1
nsv1046349 Chr.16:819378 - 942590 on Build GRCh38 Loss LMF1 LMF1-AS1 LOC107984876
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LINC00235 MIR5587 SSTR5-AS1 STUB1 HAGHL LMF1 RHBDL1 RAB40C JMJD8 GNG13 MIR662 MIR3176 CHTF18 LOC107984876 CAPN15 LOC107987233 WDR24 FAM173A LMF1-AS1 RAB11FIP3 CCDC78 RHOT2 MSLN RPUSD1 LOC101929280 SSTR5 METRN SOX8 C1QTNF8 NARFL MCRIP2 WFIKKN1 LOC105371184 LOC100287175 WDR90 NHLRC4 LOC105371038 PRR25 PIGQ METTL26 FBXL16 PRR35

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