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Gene Symbol
TPSD1
Assay Reference Genome
Location

Chr.16:1258160 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03921146_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 23430

Gene Name:

 tryptase delta 1

Gene Aliases:

 MCP7-LIKE, MCP7L1, MMCP-7L

Location:

 Chr.16:1256272-1258493 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TPSD1 NM_012217.2 4 631 NP_036349.1
AF206664.1 3 468 AAG35694.1
BC069143.1 4 622 AAH69143.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TPSB2 C16orf91 NPRL3 NTHL1 LOC729652 RPUSD1 WFIKKN1 TRAF7 TMEM204 MIR6767 HBM CASKIN1 PGP POLR3K HAGHL CCNF MIR6511B1 TPSAB1 LOC107987233 GFER UBE2I TSC2 RPS2 HS3ST6 PKD1 HBQ1 AXIN1 LMF1 SOX8 LOC100134368 MCRIP2 LOC107984876 LOC105371038 MRPS34 FAM173A LOC105371184 C16orf59 RGS11 SNORA78 ARHGDIG DNASE1L2 SNRNP25 ABCA17P SNHG19 MLST8 MIR3677 METTL26 UNKL TBC1D24 LOC101929280 KCTD5 LOC106660606 MIR3178 NOXO1 PDPK1 METRN NDUFB10 ERVK13-1 MIR662 RAB40C PRR25 MIR4516 RNF151 SNORD60 WASIR2 C1QTNF8 CRAMP1 PIGQ LOC105371045 MSLN TMEM8A LOC105371047 LINC00235 JMJD8 TBL3 CCDC154 MSRB1 HBZ RPL3L MEIOB SLC9A3R2 HBA1 HAGH ATP6V0C E4F1 MIR940 NPW LOC100287175 STUB1 CAPN15 FLJ42627 RHBDL1 LOC105371046 LMF1-AS1 PTX4 PDIA2 PRSS27 MIR5587 SPSB3 BRICD5 TELO2 FAHD1 MIR6768 LOC652276 SNORA10 FBXL16 LOC105371049 CLCN7 CCDC78 SNORA64 MPG SSTR5-AS1 CHTF18 HBA2 DDX11L10 TSR3 NHLRC4 ECI1 AMDHD2 CEMP1 NME3 RPL23AP5 MIR3176 PRSS29P CACNA1H NTN3 MIR1225 ZNF598 RAB26 RNPS1 MIR4717 LUC7L SNHG9 IGFALS WDR90 NME4 MIR3180-5 BAIAP3 RHOT2 WDR24 MRPL28 TPSD1 PRR35 HN1L SYNGR3 MIR3177 GNPTG RAB11FIP3 TPSG1 IFT140 MAPK8IP3 SSTR5 RHBDF1 GNG13 ABCA3 NUBP2 NARFL DECR2 FAM234A EME2 MIR6859-4 LINC00254
nsv571109 Chr.16:1205545 - 1287716 on Build GRCh38 Gain TPSB2 TPSD1 PRSS29P CACNA1H TPSG1 TPSAB1
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss TPSB2 TSR3 UBE2I UNKL GNPTG TPSG1 SSTR5 LMF1 SOX8 BAIAP3 TPSD1 PRSS29P CACNA1H TPSAB1 C1QTNF8 LMF1-AS1 SSTR5-AS1
nsv1051302 Chr.16:1162523 - 1299208 on Build GRCh38 Gain TPSB2 TPSD1 PRSS29P CACNA1H TPSG1 TPSAB1
nsv1046885 Chr.16:1063695 - 1299208 on Build GRCh38 Gain TPSB2 TPSD1 PRSS29P CACNA1H TPSG1 TPSAB1 C1QTNF8 SSTR5 SSTR5-AS1
nsv1708 Chr.16:1228093 - 1263588 on Build GRCh38 Deletion TPSB2 TPSD1 PRSS29P TPSAB1
nsv833117 Chr.16:1217597 - 1318867 on Build GRCh38 Loss TPSB2 UBE2I TPSD1 PRSS29P CACNA1H TPSG1 TPSAB1
nsv571101 Chr.16:1078406 - 1287716 on Build GRCh38 Gain TPSB2 TPSD1 PRSS29P CACNA1H TPSG1 TPSAB1 C1QTNF8 SSTR5 SSTR5-AS1
nsv571108 Chr.16:1202441 - 1283386 on Build GRCh38 Loss TPSB2 TPSD1 PRSS29P CACNA1H TPSG1 TPSAB1
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss LOC105371045 TPSB2 TSR3 UBE2I CCDC154 C16orf91 UNKL GNPTG TPSG1 SSTR5 LMF1 SOX8 LOC107984876 BAIAP3 CLCN7 TPSD1 PRSS29P CACNA1H TPSAB1 C1QTNF8 LMF1-AS1 SSTR5-AS1
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain TPSB2 TSR3 UBE2I UNKL GNPTG TPSG1 SSTR5 BAIAP3 TPSD1 PRSS29P CACNA1H TPSAB1 C1QTNF8 SSTR5-AS1
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion LOC105371045 TPSB2 LOC105371047 TSR3 UBE2I CCDC154 C16orf91 PTX4 UNKL GNPTG TMEM204 TPSG1 IFT140 TELO2 BAIAP3 CLCN7 TPSD1 PRSS29P CACNA1H TPSAB1
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss TSR3 UBE2I C16orf91 BAIAP3 UNKL TPSD1 PRSS29P GNPTG TPSAB1
esv3581926 Chr.16:1247258 - 1270592 on Build GRCh38 Loss TPSD1 PRSS29P
nsv515770 Chr.16:1257675 - 1299928 on Build GRCh38 Loss TPSD1 PRSS29P
nsv571105 Chr.16:1148938 - 1263381 on Build GRCh38 Loss TPSB2 TPSD1 PRSS29P CACNA1H TPSG1 TPSAB1

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More Information


Additional Information:

For this assay, SNP(s) [rs113045458] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Function(s) Process(es)


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