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See other TAF1C CNV Assays ›
Gene Symbol
TAF1C
Assay Reference Genome
Location

Chr.16:84180522 on build GRCh38
Cytoband
16q24.1
Assay ID Hs03921976_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9013

Gene Name:

 TATA-box binding protein associated factor, RNA polymerase I subunit C

Gene Aliases:

 MGC:39976, SL1, TAFI110, TAFI95

Location:

 Chr.16:84177847-84187070 on Build GRCh38

Assay Gene Location:

 Within Intron 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAF1C NM_001243156.1 NP_001230085.1
NM_001243157.1 NP_001230086.1
NM_001243158.1 NP_001230087.1
NM_001243159.1 NP_001230088.1
NM_001243160.1 NP_001230089.1
NM_005679.3 NP_005670.3
NM_139353.2 NP_647610.2
XM_005256226.3 XP_005256283.1
XM_005256227.3 XP_005256284.1
XM_006721325.3 XP_006721388.1
XM_006721326.3 XP_006721389.1
XM_017023845.1 XP_016879334.1
XM_017023846.1 XP_016879335.1
XM_017023847.1 XP_016879336.1
XM_017023848.1 XP_016879337.1
AB209594.1 11 2149 BAD92831.1
AK097031.1
AK299060.1
AK299347.1
AK304261.1
AK315982.1
BC028131.1 AAH28131.1
L39059.1 AAA62861.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639413 Chr.16:84172318 - 84253359 on Build GRCh38 Loss ADAD2 KCNG4 DNAAF1 TAF1C
nsv833309 Chr.16:84076867 - 84248591 on Build GRCh38 Loss ADAD2 LOC729887 KCNG4 HSDL1 DNAAF1 TAF1C MBTPS1
nsv1065790 Chr.16:83830329 - 84243597 on Build GRCh38 Loss ADAD2 LOC729887 MLYCD KCNG4 OSGIN1 SLC38A8 HSDL1 LOC105371371 DNAAF1 TAF1C NECAB2 MBTPS1
esv2761930 Chr.16:84007420 - 84312461 on Build GRCh38 Gain ADAD2 WFDC1 LOC729887 LOC105376777 KCNG4 SLC38A8 HSDL1 DNAAF1 TAF1C MBTPS1
nsv523437 Chr.16:84176132 - 84196770 on Build GRCh38 Loss ADAD2 DNAAF1 TAF1C
nsv573423 Chr.16:84179104 - 84190716 on Build GRCh38 Loss TAF1C
esv3639414 Chr.16:84176251 - 84352273 on Build GRCh38 Loss ADAD2 WFDC1 LOC105376777 KCNG4 DNAAF1 TAF1C
esv3639412 Chr.16:84170074 - 84221406 on Build GRCh38 Loss ADAD2 KCNG4 DNAAF1 TAF1C
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain CRISPLD2 LOC101928474 LOC101928557 EMC8 LINC00311 FLJ30679 MTHFSD FOXC2-AS1 TAF1C LOC146513 C16orf74 LOC105371374 LOC102724344 GSE1 ZDHHC7 KCNG4 KLHL36 USP10 MIR5093 LINC00917 TLDC1 LINC01082 LOC101928614 WFDC1 FOXL1 LOC105376777 FAM92B MIR1910 ATP2C2 IRF8 COTL1 COX4I1 DNAAF1 ADAD2 LINC01081 FOXC2 LOC440390 FOXF1 FENDRR KIAA0513 LOC400548 GINS2 MIR6774
nsv1059227 Chr.16:84029323 - 84233403 on Build GRCh38 Loss ADAD2 LOC729887 KCNG4 SLC38A8 HSDL1 DNAAF1 TAF1C MBTPS1

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