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See other LMF1 CNV Assays ›
Gene Symbol
LMF1
Assay Reference Genome
Location

Chr.16:929703 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03924304_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 64788

Gene Name:

 lipase maturation factor 1

Gene Aliases:

 C16orf26, HMFN1876, JFP11, TMEM112, TMEM112A

Location:

 Chr.16:853632-981615 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1 NM_022773.2 NP_073610.2
NR_033645.1
NR_033646.1
XM_006720928.2 XP_006720991.1
XM_006720929.3 XP_006720992.1
XM_011522614.2 XP_011520916.1
XM_011522615.1 XP_011520917.1
XM_011522617.2 XP_011520919.1
XM_011522618.2 XP_011520920.1
XM_017023575.1 XP_016879064.1
XM_017023576.1 XP_016879065.1
XM_017023577.1 XP_016879066.1
XM_017023578.1 XP_016879067.1
XM_017023579.1 XP_016879068.1
XM_017023580.1 XP_016879069.1
XM_017023581.1 XP_016879070.1
AB075873.1 BAD38655.1
AK022743.1 BAB14218.1
AK025955.1 BAB15295.1
AK093050.1
AK125201.1
AK225065.1
AK225406.1
AK294329.1
AK294932.1
BC010738.1 AAH10738.2
DA200865.1

Target Gene Details

Entrez Gene ID:

 101929387

Gene Name:

 LMF1 antisense RNA 1

Gene Aliases:

 LA16c-366D3.1

Location:

 Chr.16:921033-934524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1-AS1 NR_110945.1
NR_110946.1
BM547968.1
BX397433.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571049 Chr.16:929006 - 945894 on Build GRCh38 Loss LMF1 LMF1-AS1
nsv571046 Chr.16:828324 - 1202441 on Build GRCh38 Gain CACNA1H LOC107984876 LMF1 LMF1-AS1 SOX8 SSTR5 C1QTNF8 SSTR5-AS1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC105371184 PIGQ RPUSD1 AMDHD2 CHTF18 KCTD5 ECI1 RHBDF1 SSTR5 RAB26 NME4 HBA1 CCDC78 JMJD8 METRN HBQ1 FBXL16 FAHD1 SNORA78 LUC7L PRR25 TSR3 NPW MSLN LOC105371049 MCRIP2 MIR3677 LOC101929280 HS3ST6 LOC107987233 DNASE1L2 LOC106660606 GNG13 NUBP2 MIR6768 PDIA2 CRAMP1 MIR3178 LOC652276 WDR90 WASIR2 FAM234A NTN3 MSRB1 MRPS34 MEIOB RNPS1 HBZ LOC100287175 ARHGDIG TRAF7 CCNF TPSD1 ABCA17P CACNA1H UNKL RHBDL1 HBA2 NARFL SNORA64 MIR6767 RHOT2 LOC105371038 LOC100134368 SSTR5-AS1 BAIAP3 PDPK1 ZNF598 MIR4717 HBM FLJ42627 GNPTG PRSS27 RAB11FIP3 LOC105371046 ERVK13-1 UBE2I C16orf91 TBL3 C16orf59 BRICD5 WFIKKN1 METTL26 MIR1225 RPL3L AXIN1 PTX4 GFER MAPK8IP3 HAGH SNHG19 HAGHL DECR2 TMEM8A PKD1 LMF1-AS1 RPL23AP5 RNF151 RPS2 STUB1 LOC105371047 RAB40C EME2 MIR662 CASKIN1 NHLRC4 IFT140 LOC729652 NDUFB10 SNORD60 PGP MIR6511B1 TELO2 RGS11 PRSS29P TPSG1 ABCA3 TMEM204 NME3 FAM173A DDX11L10 SNRNP25 WDR24 LINC00235 NPRL3 CEMP1 CAPN15 SNHG9 TBC1D24 TSC2 LMF1 MIR3177 ATP6V0C LINC00254 TPSB2 SYNGR3 MIR3180-5 NOXO1 MLST8 LOC107984876 MPG HN1L SOX8 POLR3K MIR3176 CCDC154 PRR35 E4F1 CLCN7 SPSB3 IGFALS SNORA10 MIR6859-4 MRPL28 SLC9A3R2 TPSAB1 MIR4516 LOC105371045 MIR5587 MIR940 C1QTNF8 NTHL1
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss LOC107984876 TSR3 SOX8 SSTR5 GNPTG CCDC154 TPSD1 UBE2I C16orf91 CLCN7 CACNA1H PRSS29P UNKL LMF1 TPSAB1 LMF1-AS1 TPSG1 LOC105371045 C1QTNF8 TPSB2 SSTR5-AS1 BAIAP3
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss TSR3 SOX8 SSTR5 GNPTG TPSD1 UBE2I CACNA1H PRSS29P UNKL LMF1 TPSAB1 LMF1-AS1 TPSG1 C1QTNF8 TPSB2 SSTR5-AS1 BAIAP3
nsv1046349 Chr.16:819378 - 942590 on Build GRCh38 Loss LOC107984876 LMF1 LMF1-AS1
nsv1042868 Chr.16:881686 - 966057 on Build GRCh38 Loss LOC107984876 LMF1 LMF1-AS1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LOC105371184 PIGQ RPUSD1 CHTF18 LOC100287175 WDR24 SSTR5 LINC00235 CAPN15 HAGHL RHBDL1 CCDC78 LMF1 LMF1-AS1 STUB1 NARFL JMJD8 METRN RHOT2 FBXL16 LOC105371038 SSTR5-AS1 RAB40C MIR662 NHLRC4 LOC107984876 PRR25 MSLN MCRIP2 SOX8 LOC101929280 MIR3176 RAB11FIP3 PRR35 LOC107987233 GNG13 MIR5587 WDR90 WFIKKN1 METTL26 C1QTNF8 FAM173A
esv2750262 Chr.16:929704 - 930358 on Build GRCh38 Deletion LMF1 LMF1-AS1
nsv457316 Chr.16:884180 - 933163 on Build GRCh38 Loss LOC107984876 LMF1 LMF1-AS1

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