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See other LMF1 CNV Assays ›
Gene Symbol
LMF1
Assay Reference Genome
Location

Chr.16:930681 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03924436_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 64788

Gene Name:

 lipase maturation factor 1

Gene Aliases:

 C16orf26, HMFN1876, JFP11, TMEM112, TMEM112A

Location:

 Chr.16:853632-981615 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1 NM_022773.2 NP_073610.2
NR_033645.1
NR_033646.1
XM_006720928.2 XP_006720991.1
XM_006720929.3 XP_006720992.1
XM_011522614.2 XP_011520916.1
XM_011522615.1 XP_011520917.1
XM_011522617.2 XP_011520919.1
XM_011522618.2 XP_011520920.1
XM_017023575.1 XP_016879064.1
XM_017023576.1 XP_016879065.1
XM_017023577.1 XP_016879066.1
XM_017023578.1 XP_016879067.1
XM_017023579.1 XP_016879068.1
XM_017023580.1 XP_016879069.1
XM_017023581.1 XP_016879070.1
AB075873.1 BAD38655.1
AK022743.1 BAB14218.1
AK025955.1 BAB15295.1
AK093050.1
AK125201.1
AK225065.1
AK225406.1
AK294329.1
AK294932.1
BC010738.1 AAH10738.2
DA200865.1

Target Gene Details

Entrez Gene ID:

 101929387

Gene Name:

 LMF1 antisense RNA 1

Gene Aliases:

 LA16c-366D3.1

Location:

 Chr.16:921033-934524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1-AS1 NR_110945.1
NR_110946.1
BM547968.1
BX397433.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571049 Chr.16:929006 - 945894 on Build GRCh38 Loss LMF1 LMF1-AS1
nsv571046 Chr.16:828324 - 1202441 on Build GRCh38 Gain LMF1 SOX8 SSTR5 C1QTNF8 LOC107984876 LMF1-AS1 CACNA1H SSTR5-AS1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TMEM8A JMJD8 PGP METRN RHOT2 BAIAP3 FAM234A NTN3 AMDHD2 C16orf91 NTHL1 LOC106660606 AXIN1 LOC100134368 RAB40C GNPTG IGFALS MIR1225 PKD1 SNORA78 RNF151 MIR5587 MSLN SYNGR3 RPS2 TBL3 LINC00235 LOC105371047 NOXO1 FAHD1 LOC105371049 TRAF7 LOC107987233 UNKL MCRIP2 SNRNP25 MSRB1 HBZ LOC107984876 MEIOB EME2 CLCN7 LOC652276 DDX11L10 WDR24 RPL3L FBXL16 RGS11 BRICD5 ARHGDIG STUB1 ABCA17P MIR6859-4 TSC2 HAGH SNORA10 HBA1 METTL26 PDIA2 PIGQ RHBDF1 LOC105371045 RAB26 FLJ42627 KCTD5 MIR3178 LINC00254 PRR35 TPSAB1 NPRL3 LOC101929280 HBQ1 WASIR2 TSR3 IFT140 MIR6511B1 LMF1-AS1 NUBP2 MIR940 HBM CCNF SSTR5-AS1 ABCA3 SOX8 DNASE1L2 C1QTNF8 PRSS27 MIR4717 E4F1 POLR3K CEMP1 MPG LOC100287175 SNORA64 MIR6767 MIR3177 MIR3180-5 TBC1D24 UBE2I ECI1 HS3ST6 MIR662 NPW CACNA1H SNHG19 HBA2 RPL23AP5 SLC9A3R2 LOC105371038 TELO2 SNHG9 PRR25 MIR6768 DECR2 NME3 MRPS34 SPSB3 ZNF598 SSTR5 MIR3677 PTX4 RHBDL1 NHLRC4 LUC7L HAGHL HN1L MAPK8IP3 NME4 CRAMP1 ATP6V0C TPSB2 C16orf59 RAB11FIP3 NDUFB10 MIR3176 ERVK13-1 MLST8 LOC729652 FAM173A LMF1 MRPL28 CAPN15 MIR4516 TMEM204 GNG13 SNORD60 PDPK1 PRSS29P RPUSD1 NARFL LOC105371046 CASKIN1 TPSG1 TPSD1 WDR90 RNPS1 LOC105371184 CCDC78 CHTF18 GFER WFIKKN1 CCDC154
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss TPSG1 TPSAB1 TSR3 TPSD1 TPSB2 LMF1-AS1 BAIAP3 UBE2I C16orf91 UNKL SSTR5-AS1 LMF1 SOX8 SSTR5 C1QTNF8 LOC107984876 GNPTG LOC105371045 CACNA1H CLCN7 PRSS29P CCDC154
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss TPSG1 TPSAB1 TSR3 TPSD1 TPSB2 LMF1-AS1 BAIAP3 UBE2I UNKL SSTR5-AS1 LMF1 SOX8 SSTR5 C1QTNF8 GNPTG CACNA1H PRSS29P
nsv1046349 Chr.16:819378 - 942590 on Build GRCh38 Loss LMF1 LOC107984876 LMF1-AS1
nsv1042868 Chr.16:881686 - 966057 on Build GRCh38 Loss LMF1 LOC107984876 LMF1-AS1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion FBXL16 HAGHL JMJD8 METRN RHOT2 STUB1 RAB11FIP3 MIR3176 FAM173A LMF1 MIR662 CAPN15 RAB40C METTL26 PIGQ GNG13 RPUSD1 NARFL PRR35 MIR5587 MSLN LOC101929280 WDR90 LMF1-AS1 LOC105371184 LOC105371038 LINC00235 PRR25 LOC107987233 SSTR5-AS1 SOX8 SSTR5 CCDC78 MCRIP2 C1QTNF8 LOC107984876 RHBDL1 CHTF18 WFIKKN1 NHLRC4 LOC100287175 WDR24
nsv457316 Chr.16:884180 - 933163 on Build GRCh38 Loss LMF1 LOC107984876 LMF1-AS1

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