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See other TSR3 CNV Assays ›
Gene Symbol
TSR3
Assay Reference Genome
Location

Chr.16:1351353 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03924824_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115939

Gene Name:

 TSR3, acp transferase ribosome maturation factor

Gene Aliases:

 C16orf42

Location:

 Chr.16:1349240-1351872 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSR3 NM_001001410.2 NP_001001410.1
BC013943.1 AAH13943.1
BC016699.1 AAH16699.1
BC017325.2 AAH17325.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain PTX4 TELO2 UBE2I LOC105371045 C16orf91 BAIAP3 CCDC154 UNKL GNPTG CLCN7 IFT140 TSR3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TSC2 NDUFB10 LOC106660606 C1QTNF8 MEIOB CASKIN1 MIR3180-5 FAHD1 AMDHD2 E4F1 CLCN7 ABCA3 LOC101929280 CHTF18 CAPN15 MIR4717 RAB11FIP3 UNKL MSLN MPG NOXO1 C16orf59 PRR35 TBL3 LUC7L CCNF SSTR5-AS1 MLST8 MIR6511B1 TPSG1 CRAMP1 STUB1 UBE2I MIR6767 RNPS1 NME4 SSTR5 FBXL16 AXIN1 MIR6859-4 WASIR2 ABCA17P MRPS34 LOC652276 SOX8 MAPK8IP3 RPL3L GNPTG SNORD60 PDPK1 DECR2 RHBDF1 HBQ1 MCRIP2 HAGHL MIR3177 METTL26 LOC100134368 MIR6768 LOC729652 FAM234A TPSAB1 NTN3 CACNA1H RHOT2 LOC105371049 NPW MIR5587 GFER RPL23AP5 SYNGR3 RHBDL1 CCDC78 HBZ LINC00235 DNASE1L2 TRAF7 LMF1-AS1 TELO2 HS3ST6 C16orf91 LOC105371038 RAB40C HBA1 MSRB1 RPS2 ARHGDIG TBC1D24 SNORA64 RAB26 ERVK13-1 SNHG9 TPSD1 DDX11L10 NHLRC4 SNORA10 LMF1 ATP6V0C PKD1 MRPL28 POLR3K RNF151 HAGH HN1L LOC100287175 MIR940 LOC105371045 GNG13 LOC107984876 PRSS29P NUBP2 NME3 KCTD5 PRR25 PDIA2 IGFALS TSR3 WDR24 SLC9A3R2 WDR90 METRN NTHL1 HBA2 SNORA78 FLJ42627 LINC00254 TPSB2 LOC107987233 SNRNP25 TMEM8A LOC105371046 NPRL3 ECI1 MIR3178 HBM WFIKKN1 NARFL PGP PIGQ SNHG19 MIR3176 SPSB3 PTX4 LOC105371047 MIR1225 MIR662 TMEM204 FAM173A MIR4516 MIR3677 IFT140 RGS11 BRICD5 JMJD8 BAIAP3 LOC105371184 CCDC154 ZNF598 RPUSD1 PRSS27 CEMP1 EME2
nsv974746 Chr.16:1328043 - 1351866 on Build GRCh38 Duplication BAIAP3 TSR3
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss LMF1-AS1 C1QTNF8 SSTR5-AS1 C16orf91 TPSB2 SOX8 TPSAB1 GNPTG CACNA1H CLCN7 TPSG1 TPSD1 UBE2I LOC105371045 BAIAP3 LOC107984876 LMF1 CCDC154 UNKL PRSS29P SSTR5 TSR3
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain C1QTNF8 SSTR5-AS1 TPSB2 TPSAB1 GNPTG CACNA1H TPSG1 TPSD1 UBE2I BAIAP3 UNKL PRSS29P SSTR5 TSR3
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss LMF1-AS1 C1QTNF8 SSTR5-AS1 TPSB2 SOX8 TPSAB1 GNPTG CACNA1H TPSG1 TPSD1 UBE2I BAIAP3 LMF1 UNKL PRSS29P SSTR5 TSR3
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion PTX4 TELO2 C16orf91 LOC105371047 TPSB2 TPSAB1 TMEM204 GNPTG CACNA1H CLCN7 IFT140 TPSG1 TPSD1 UBE2I LOC105371045 BAIAP3 CCDC154 UNKL PRSS29P TSR3
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss TPSD1 UBE2I C16orf91 BAIAP3 UNKL PRSS29P TPSAB1 GNPTG TSR3

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s)


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