Hs03925058_cn

• Gene Symbol: PIGQ
• Assay Reference Genome Location: Chr.16:573166 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 9091
• Gene Name: phosphatidylinositol glycan anchor biosynthesis class Q
• Gene Aliases: GPI1, c407A10.1
• Location: Chr.16:569968-584136 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PIGQ	NM_004204.3			NP_004195.2
	NM_148920.2			NP_683721.1
	AB003723.1			BAA24948.1
	AF030177.1			AAC32661.1
	AK300297.1
	AK314361.1
	BC006377.2			AAH06377.1
	DA206420.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833113	Chr.16:506513 - 628160 on Build GRCh38	Loss	CAPN15 LOC101929280 LINC00235 NHLRC4 RAB11FIP3 LOC107987233 MIR3176 RAB40C PIGQ MIR5587 PRR35
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	SNORA78 MRPL28 SLC9A3R2 MSLN CACNA1H SYNGR3 TMEM8A HBA2 TPSG1 PRSS29P MIR662 SSTR5-AS1 NDUFB10 RHOT2 LOC729652 LINC00235 SNRNP25 NUBP2 LMF1-AS1 DECR2 NME4 MEIOB LOC105371046 PTX4 MCRIP2 POLR3K E4F1 NHLRC4 LOC105371049 RAB11FIP3 SNORA64 CCDC154 LOC107984876 RPL23AP5 LOC105371184 MIR6767 PRR25 RPUSD1 RAB40C HAGHL FLJ42627 CAPN15 KCTD5 SSTR5 CCNF WDR24 LUC7L LOC107987233 RPS2 MIR5587 SPSB3 PKD1 RNPS1 FAM173A FAHD1 LOC105371045 BRICD5 DDX11L10 PRR35 TPSD1 MPG LOC100287175 TSC2 CASKIN1 LOC105371047 LOC101929280 SNHG19 UNKL CCDC78 NOXO1 METRN PDIA2 RAB26 ERVK13-1 TRAF7 MIR940 LOC652276 DNASE1L2 LINC00254 ARHGDIG TBL3 MIR4516 MIR1225 MAPK8IP3 HBA1 C16orf59 PRSS27 NTHL1 SNORD60 WASIR2 RHBDF1 MIR3177 HAGH RNF151 TPSAB1 C1QTNF8 ATP6V0C IFT140 MIR6511B1 RGS11 HBM HBQ1 NPW MIR3178 MRPS34 SOX8 FBXL16 AMDHD2 IGFALS NTN3 TPSB2 TELO2 MIR4717 ZNF598 MIR3677 METTL26 RPL3L PDPK1 GNPTG MIR6768 FAM234A CRAMP1 PIGQ WFIKKN1 LMF1 MLST8 AXIN1 WDR90 UBE2I MIR3176 TSR3 MIR6859-4 NPRL3 ABCA3 MIR3180-5 NME3 ECI1 LOC100134368 RHBDL1 CLCN7 LOC106660606 ABCA17P TMEM204 C16orf91 HS3ST6 NARFL GNG13 CHTF18 LOC105371038 EME2 CEMP1 JMJD8 PGP GFER SNORA10 TBC1D24 HBZ MSRB1 BAIAP3 SNHG9 HN1L STUB1
nsv471063	Chr.16:520623 - 852322 on Build GRCh38	Loss	FAM173A MSLN RHBDL1 MIR662 PRR35 RHOT2 LOC100287175 LOC101929280 LINC00235 FBXL16 CCDC78 METRN METTL26 NARFL MCRIP2 GNG13 NHLRC4 RAB11FIP3 CHTF18 LOC105371038 JMJD8 LOC105371184 PRR25 RPUSD1 RAB40C PIGQ WFIKKN1 HAGHL CAPN15 WDR90 WDR24 STUB1 LOC107987233 MIR3176 MIR5587
nsv526903	Chr.16:451362 - 810673 on Build GRCh38	Loss	FAM173A MSLN RHBDL1 MIR662 PRR35 RHOT2 LOC100287175 LOC101929280 LINC00235 FBXL16 CCDC78 METRN METTL26 NARFL MCRIP2 GNG13 NHLRC4 RAB11FIP3 CHTF18 LOC105371038 JMJD8 LOC105371184 PRR25 RPUSD1 RAB40C PIGQ WFIKKN1 HAGHL CAPN15 WDR90 WDR24 STUB1 LOC107987233 MIR3176 MIR5587
nsv952898	Chr.16:495001 - 1132900 on Build GRCh38	Deletion	FAM173A MSLN RHBDL1 C1QTNF8 MIR662 SSTR5-AS1 PRR35 RHOT2 LOC100287175 SOX8 LOC101929280 LINC00235 FBXL16 LMF1-AS1 CCDC78 METRN METTL26 NARFL MCRIP2 GNG13 NHLRC4 RAB11FIP3 CHTF18 LOC105371038 LOC107984876 JMJD8 LOC105371184 PRR25 RPUSD1 RAB40C PIGQ WFIKKN1 LMF1 HAGHL CAPN15 SSTR5 WDR90 WDR24 STUB1 LOC107987233 MIR3176 MIR5587
dgv4823n54	Chr.16:562698 - 662867 on Build GRCh38	Loss	LOC100287175 MCRIP2 LOC101929280 NHLRC4 LOC105371038 WDR90 LOC107987233 RAB40C PIGQ PRR35 WFIKKN1 METTL26
nsv457304	Chr.16:554554 - 611142 on Build GRCh38	Gain	CAPN15 LOC101929280 NHLRC4 LOC107987233 RAB40C PIGQ PRR35
nsv1160325	Chr.16:506925 - 836376 on Build GRCh38	Duplication	FAM173A MSLN RHBDL1 MIR662 PRR35 RHOT2 LOC100287175 LOC101929280 LINC00235 FBXL16 CCDC78 METRN METTL26 NARFL MCRIP2 GNG13 NHLRC4 RAB11FIP3 CHTF18 LOC105371038 JMJD8 LOC105371184 PRR25 RPUSD1 RAB40C PIGQ WFIKKN1 HAGHL CAPN15 WDR90 WDR24 STUB1 LOC107987233 MIR3176 MIR5587

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)

carbohydrate metabolic process
preassembly of GPI anchor in ER membrane

Function(s)

phosphatidylinositol N-acetylglucosaminyltransferase activity