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Gene Symbol
SPATA2L
Assay Reference Genome
Location

Chr.16:89699909 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03925079_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 124044

Gene Name:

 spermatogenesis associated 2 like

Gene Aliases:

 C16orf76, tamo

Location:

 Chr.16:89696357-89701993 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA2L NM_152339.3 NP_689552.2
XM_005256279.4 XP_005256336.1
AK127372.1
BC027606.1 AAH27606.1
BC039608.1 AAH39608.1
BC053588.1 AAH53588.1
BI917028.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952079 Chr.16:89685593 - 89749492 on Build GRCh38 Deletion VPS9D1-AS1 CDK10 ZNF276 SPATA2L VPS9D1 FANCA
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain VPS9D1-AS1 LOC105371419 SPIRE2 CDK10 LOC107984817 ZNF276 SPATA2L VPS9D1 FANCA SPATA33
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss TCF25 MC1R DEF8 LOC105371419 SPIRE2 CDK10 CHMP1A LOC107984817 DPEP1 AFG3L1P GAS8 DBNDD1 TUBB3 GAS8-AS1 VPS9D1-AS1 CENPBD1 ZNF276 SPATA2L VPS9D1 FANCA SPATA33
nsv516241 Chr.16:89696002 - 89723490 on Build GRCh38 Loss VPS9D1-AS1 CDK10 ZNF276 SPATA2L VPS9D1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss ZNF778 MC1R TUBB8P7 CDK10 CHMP1A FAM157C AFG3L1P CPNE7 LOC101927817 TUBB3 GAS8-AS1 CENPBD1 SPG7 ANKRD11 SPATA2L RPL13 VPS9D1 TCF25 DEF8 LOC105371419 SPIRE2 LOC105371414 LOC107984817 URAHP PRDM7 DPEP1 LOC100287036 GAS8 DBNDD1 VPS9D1-AS1 SNORD68 ZNF276 FANCA SPATA33
nsv833330 Chr.16:89678466 - 89741783 on Build GRCh38 Loss VPS9D1-AS1 CDK10 ZNF276 SPATA2L VPS9D1 FANCA
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC107987238 ZNF778 TUBB8P7 CHMP1A PIEZO1 LOC400558 LOC101927817 TUBB3 CENPBD1 CTU2 SPATA2L MIR4722 GALNS TCF25 SPIRE2 LOC107984817 PRDM7 DPEP1 CYBA GAS8 SLC22A31 APRT VPS9D1-AS1 SNORD68 LOC105371409 LOC101927793 SNAI3 FANCA MC1R CDH15 SNAI3-AS1 TRAPPC2L CDK10 PABPN1L FAM157C AFG3L1P CPNE7 GAS8-AS1 SPG7 RNF166 ANKRD11 IL17C RPL13 CDT1 VPS9D1 DEF8 LOC105371419 LOC339059 LOC105371414 LOC100289580 URAHP LOC100287036 DBNDD1 LINC00304 ZNF276 ACSF3 LOC100129697 MVD CBFA2T3 SPATA33
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion CDK10 CHMP1A DPEP1 CPNE7 VPS9D1-AS1 SNORD68 SPG7 ZNF276 SPATA2L RPL13 VPS9D1 FANCA SPATA33

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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