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See other CACNA1H CNV Assays ›
Gene Symbol
CACNA1H
Assay Reference Genome
Location

Chr.16:1158087 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03926161_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8912

Gene Name:

 calcium voltage-gated channel subunit alpha1 H

Gene Aliases:

 CACNA1HB, Cav3.2, ECA6, EIG6

Location:

 Chr.16:1153241-1221772 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CACNA1H NM_001005407.1 NP_001005407.1
NM_021098.2 NP_066921.2
XM_005255652.4 XP_005255709.1
XM_006720963.3 XP_006721026.1
XM_006720964.3 XP_006721027.1
XM_006720965.3 XP_006721028.1
XM_006720967.3 XP_006721030.1
XM_006720968.3 XP_006721031.1
XM_011522727.2 XP_011521029.1
XM_017023819.1 XP_016879308.1
XM_017023820.1 XP_016879309.1
XM_017023821.1 XP_016879310.1
AF051946.3 AAC67239.3
AF073931.1 AAD17668.1
AJ420779.1 CAD12646.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457315 Chr.16:828324 - 1202441 on Build GRCh38 Gain SSTR5-AS1 LMF1 SOX8 LMF1-AS1 LOC107984876 C1QTNF8 CACNA1H SSTR5
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SLC9A3R2 LOC105371045 AXIN1 SNRNP25 C1QTNF8 GNPTG NPRL3 DDX11L10 KCTD5 MIR3177 FAHD1 SSTR5 LOC105371046 HN1L PRR35 TBC1D24 HBM MIR4717 MIR6859-4 TELO2 LINC00254 GNG13 E4F1 RHBDF1 DECR2 POLR3K ERVK13-1 TPSB2 ABCA3 PRSS29P SNORD60 MRPL28 C16orf59 METRN HS3ST6 HBZ HBA1 WFIKKN1 AMDHD2 PIGQ ARHGDIG LOC652276 MIR3180-5 SNORA78 LOC105371049 CEMP1 CCDC154 JMJD8 RAB26 MIR5587 MLST8 ABCA17P FLJ42627 NME3 IGFALS MIR3176 RPL23AP5 NME4 FAM234A NDUFB10 BAIAP3 SOX8 SNHG19 BRICD5 LOC100287175 MIR3677 PDIA2 CACNA1H NTHL1 RPL3L LUC7L GFER WDR90 CRAMP1 ATP6V0C RNPS1 HAGHL LOC729652 SPSB3 TPSD1 ZNF598 NOXO1 DNASE1L2 PTX4 LOC107984876 HAGH UNKL MPG SSTR5-AS1 CASKIN1 LOC105371047 NHLRC4 SNHG9 RAB40C EME2 LOC105371038 WDR24 C16orf91 MIR6767 MRPS34 TSR3 PDPK1 LMF1 FAM173A CLCN7 TSC2 MCRIP2 CCNF ECI1 MEIOB MIR3178 HBA2 SNORA64 TPSG1 MIR4516 MSLN SNORA10 RPUSD1 HBQ1 CCDC78 TRAF7 TBL3 CAPN15 MIR940 MIR6768 LOC101929280 PRSS27 FBXL16 STUB1 MSRB1 NUBP2 MIR1225 PKD1 CHTF18 MIR662 RAB11FIP3 RHBDL1 WASIR2 MIR6511B1 NPW NARFL LMF1-AS1 TMEM204 IFT140 LOC100134368 PRR25 LOC107987233 LOC105371184 RPS2 TMEM8A TPSAB1 PGP MAPK8IP3 LOC106660606 SYNGR3 UBE2I RHOT2 RNF151 METTL26 NTN3 RGS11 LINC00235
nsv571101 Chr.16:1078406 - 1287716 on Build GRCh38 Gain SSTR5-AS1 TPSB2 PRSS29P C1QTNF8 CACNA1H SSTR5 TPSG1 TPSAB1 TPSD1
nsv471067 Chr.16:997728 - 1220162 on Build GRCh38 Gain SSTR5-AS1 C1QTNF8 CACNA1H SSTR5
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss LMF1 LOC105371045 BAIAP3 SOX8 CLCN7 LOC107984876 C1QTNF8 CACNA1H UNKL TPSG1 TPSAB1 SSTR5-AS1 GNPTG TPSB2 CCDC154 PRSS29P LMF1-AS1 UBE2I SSTR5 C16orf91 TPSD1 TSR3
dgv2691n100 Chr.16:1002943 - 1247707 on Build GRCh38 Gain SSTR5-AS1 TPSB2 C1QTNF8 CACNA1H SSTR5 TPSG1 TPSAB1
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss LMF1 BAIAP3 SOX8 C1QTNF8 CACNA1H UNKL TPSG1 TPSAB1 SSTR5-AS1 GNPTG TPSB2 PRSS29P LMF1-AS1 UBE2I SSTR5 TPSD1 TSR3
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion LOC105371045 BAIAP3 CLCN7 PTX4 TELO2 CACNA1H UNKL TPSG1 TPSAB1 LOC105371047 GNPTG TPSB2 CCDC154 PRSS29P UBE2I TMEM204 C16orf91 IFT140 TPSD1 TSR3
nsv1160327 Chr.16:1063695 - 1222472 on Build GRCh38 Deletion SSTR5-AS1 C1QTNF8 CACNA1H SSTR5 TPSG1
dgv4841n54 Chr.16:1142213 - 1220162 on Build GRCh38 Loss CACNA1H
nsv457326 Chr.16:1148938 - 1220162 on Build GRCh38 Loss CACNA1H
nsv571102 Chr.16:1084818 - 1257675 on Build GRCh38 Loss TPSB2 C1QTNF8 CACNA1H TPSG1 TPSAB1 TPSD1

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