Hs03930261_cn

• Gene Symbol: OR1F1
• Assay Reference Genome Location: Chr.16:3203282 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 4992
• Gene Name: olfactory receptor family 1 subfamily F member 1
• Gene Aliases: OLFMF, OR16-36, OR16-37, OR16-88, OR16-89, OR16-90, OR1F10, OR1F13P, OR1F4, OR1F5, OR1F6, OR1F7, OR1F8, OR1F9, OR3-145, ORL1023
• Location: Chr.16:3188195-3206559 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
OR1F1	XM_011522506.2			XP_011520808.1
	XM_011522507.2			XP_011520809.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv471074	Chr.16:3153034 - 3227251 on Build GRCh38	Gain	OR1F1 ZNF200 OR1F2P
nsv833127	Chr.16:3152781 - 3259413 on Build GRCh38	Gain+Loss	OR1F1 ZNF200 MEFV OR1F2P
nsv1044147	Chr.16:3149392 - 3392037 on Build GRCh38	Loss	ZNF75A OR2C1 OR1F1 ZSCAN32 CASP16P ZNF200 MEFV MTRNR2L4 LINC00921 ZNF263 TIGD7 OR1F2P
esv3637657	Chr.16:3199849 - 3203610 on Build GRCh38	Loss	OR1F1
nsv1036149	Chr.16:3161307 - 3326824 on Build GRCh38	Gain	ZNF75A OR1F1 ZNF200 MEFV LINC00921 ZNF263 TIGD7 OR1F2P
nsv1713	Chr.16:3179211 - 3212512 on Build GRCh38	Insertion	OR1F1
nsv457355	Chr.16:3115424 - 3251897 on Build GRCh38	Gain	ZNF213-AS1 ZNF205 ZNF213 OR1F1 ZNF205-AS1 CASP16P ZNF200 MEFV OR1F2P
esv3581941	Chr.16:3198638 - 3205624 on Build GRCh38	Loss	OR1F1
nsv524873	Chr.16:3201522 - 3204470 on Build GRCh38	Loss	OR1F1

More Information

Additional Information:

For this assay, SNP(s) [rs78565524] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Process(es)

signal transduction
G-protein coupled receptor signaling pathway
detection of chemical stimulus involved in sensory perception of smell

Function(s)

G-protein coupled receptor activity
olfactory receptor activity