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See other LMF1 CNV Assays ›
Gene Symbol
LMF1
Assay Reference Genome
Location

Chr.16:934017 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03930552_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 64788

Gene Name:

 lipase maturation factor 1

Gene Aliases:

 C16orf26, HMFN1876, JFP11, TMEM112, TMEM112A

Location:

 Chr.16:853632-981615 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1 NM_022773.2 NP_073610.2
NR_033645.1
NR_033646.1
XM_006720928.2 XP_006720991.1
XM_006720929.3 XP_006720992.1
XM_011522614.2 XP_011520916.1
XM_011522615.1 XP_011520917.1
XM_011522618.2 XP_011520920.1
XM_017023575.1 XP_016879064.1
XM_017023576.1 XP_016879065.1
XM_017023577.1 XP_016879066.1
XM_017023578.1 XP_016879067.1
XM_017023579.1 XP_016879068.1
XM_017023580.1 XP_016879069.1
XM_017023581.1 XP_016879070.1
AB075873.1 BAD38655.1
AK022743.1 BAB14218.1
AK025955.1 BAB15295.1
AK093050.1
AK125201.1
AK225065.1
AK225406.1
AK294329.1
AK294932.1
BC010738.1 AAH10738.2
DA200865.1

Target Gene Details

Entrez Gene ID:

 101929387

Gene Name:

 LMF1 antisense RNA 1

Gene Aliases:

 LA16c-366D3.1

Location:

 Chr.16:921033-934524 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1-AS1 NR_110945.1 3 970
NR_110946.1 2 815
BM547968.1 2 815
BX397433.2 3 930

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571049 Chr.16:929006 - 945894 on Build GRCh38 Loss LMF1-AS1 LMF1
nsv571046 Chr.16:828324 - 1202441 on Build GRCh38 Gain LMF1-AS1 SOX8 LMF1 SSTR5 LOC107984876 C1QTNF8 SSTR5-AS1 CACNA1H
nsv833116 Chr.16:933070 - 1121068 on Build GRCh38 Loss LMF1-AS1 SOX8 LMF1 SSTR5 C1QTNF8 SSTR5-AS1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LMF1-AS1 SNORA78 LINC00235 NTN3 MRPS34 GNG13 FAHD1 AXIN1 RAB26 PRSS27 RGS11 PDPK1 MSRB1 MIR6767 LOC105371046 SPSB3 RHBDL1 CACNA1H SOX8 HBA2 HN1L DNASE1L2 MSLN LOC107987233 METTL26 LINC00254 LOC107984876 MPG RAB11FIP3 SSTR5-AS1 IGFALS ERVK13-1 C16orf91 SNHG19 FLJ42627 RPUSD1 RNF151 TPSD1 MEIOB TPSG1 ABCA3 FBXL16 TBC1D24 ECI1 MIR3178 GNPTG CASKIN1 WDR24 UNKL HBM GFER PIGQ MIR4717 MIR3677 JMJD8 MIR5587 MAPK8IP3 LOC729652 EME2 POLR3K SNORA64 NHLRC4 TBL3 UBE2I LOC100134368 NME3 HBZ FAM234A WFIKKN1 CCNF RAB40C LOC105371049 MIR3176 WASIR2 PRSS29P CLCN7 TPSAB1 HAGH NPW NUBP2 MRPL28 RHOT2 HAGHL ARHGDIG MIR3177 KCTD5 STUB1 TELO2 SNORA10 PRR35 DECR2 E4F1 MIR940 MCRIP2 BRICD5 ZNF598 SNRNP25 PTX4 ABCA17P MIR6768 TMEM204 LOC105371038 DDX11L10 MIR662 AMDHD2 LOC105371184 CAPN15 PKD1 CHTF18 RPS2 MIR4516 CCDC78 BAIAP3 NPRL3 HBA1 LOC106660606 PRR25 CCDC154 CRAMP1 LOC101929280 NDUFB10 PGP MLST8 MIR3180-5 ATP6V0C TSR3 LOC105371047 FAM173A CEMP1 SLC9A3R2 SSTR5 SYNGR3 C16orf59 NOXO1 TPSB2 NME4 C1QTNF8 SNORD60 LOC105371045 RNPS1 METRN TMEM8A RHBDF1 LUC7L LOC652276 TSC2 SNHG9 RPL23AP5 PDIA2 MIR6859-4 TRAF7 NTHL1 IFT140 RPL3L MIR6511B1 LOC100287175 LMF1 HS3ST6 MIR1225 WDR90 HBQ1 NARFL
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss LMF1-AS1 SOX8 UBE2I SSTR5 LOC107984876 GNPTG BAIAP3 TPSB2 C1QTNF8 SSTR5-AS1 UNKL LMF1 C16orf91 LOC105371045 PRSS29P CLCN7 CCDC154 TPSAB1 TPSD1 TPSG1 TSR3 CACNA1H
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss LMF1-AS1 SOX8 UBE2I SSTR5 GNPTG BAIAP3 TPSB2 C1QTNF8 SSTR5-AS1 UNKL LMF1 PRSS29P TPSAB1 TPSD1 TPSG1 TSR3 CACNA1H
nsv1046349 Chr.16:819378 - 942590 on Build GRCh38 Loss LMF1-AS1 LMF1 LOC107984876
nsv1042868 Chr.16:881686 - 966057 on Build GRCh38 Loss LMF1-AS1 LMF1 LOC107984876
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LMF1-AS1 LINC00235 FBXL16 RHOT2 HAGHL STUB1 SSTR5 PRR35 GNG13 WDR24 C1QTNF8 MCRIP2 PIGQ JMJD8 MIR5587 METRN LOC105371038 MIR662 NHLRC4 LOC105371184 RHBDL1 SOX8 CAPN15 CHTF18 MSLN LOC107987233 METTL26 LOC107984876 WFIKKN1 CCDC78 RAB40C MIR3176 RAB11FIP3 SSTR5-AS1 LOC100287175 LMF1 PRR25 WDR90 RPUSD1 LOC101929280 FAM173A NARFL
esv22962 Chr.16:933424 - 954272 on Build GRCh38 Gain+Loss LMF1-AS1 LMF1

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