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See other RAB40C CNV Assays ›
Gene Symbol
RAB40C
Assay Reference Genome
Location

Chr.16:604347 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03931035_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
Your Price
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441.65
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Assay Details

Target Gene Details

Entrez Gene ID:

 57799

Gene Name:

 RAB40C, member RAS oncogene family

Gene Aliases:

 RARL, RASL8C

Location:

 Chr.16:589357-629273 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RAB40C NM_001172663.1 NP_001166134.1
NM_001172664.1 NP_001166135.1
NM_001172665.1 NP_001166136.1
NM_001172666.1 NP_001166137.1
NM_021168.4 NP_066991.3
AY823398.1 AAV83924.1
BC028696.1 AAH28696.1
BG696681.1
BG715678.1
BM545442.1
BQ685517.1
BX442451.2
CX783728.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833113 Chr.16:506513 - 628160 on Build GRCh38 Loss LOC101929280 MIR3176 LOC107987233 PIGQ CAPN15 PRR35 LINC00235 RAB40C RAB11FIP3 NHLRC4 MIR5587
nsv1040486 Chr.16:600788 - 627854 on Build GRCh38 Gain RAB40C
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication ABCA17P CCDC78 TPSD1 HBA1 LOC652276 ERVK13-1 MIR6768 MIR6859-4 PKD1 MIR662 METTL26 IFT140 IGFALS FLJ42627 MRPL28 NTN3 CRAMP1 LINC00254 HS3ST6 TBC1D24 MIR1225 TPSAB1 GNPTG SSTR5-AS1 LMF1 WASIR2 CASKIN1 HBZ TPSB2 TMEM8A BRICD5 HAGHL MRPS34 HBM RPL23AP5 MIR3177 SNORA78 PTX4 RPL3L SPSB3 SNRNP25 PDPK1 C16orf91 TRAF7 GNG13 NME4 WFIKKN1 AXIN1 MIR940 MSRB1 STUB1 MIR3180-5 CCNF TSR3 AMDHD2 UBE2I FBXL16 CLCN7 LOC105371049 LOC100134368 MLST8 LOC107987233 MPG MIR6511B1 LOC100287175 LOC105371184 ABCA3 PRSS27 EME2 CCDC154 MEIOB RAB26 BAIAP3 SNORD60 CACNA1H NPW NME3 MAPK8IP3 NARFL MSLN KCTD5 C16orf59 MIR3176 FAHD1 CAPN15 HBA2 TMEM204 TPSG1 HAGH LOC101929280 RNF151 CHTF18 LOC105371047 TSC2 RNPS1 LOC107984876 SSTR5 DNASE1L2 LOC729652 SNORA64 GFER LMF1-AS1 JMJD8 ARHGDIG SNORA10 RPS2 NPRL3 RHBDL1 MCRIP2 PGP HBQ1 RGS11 METRN LOC106660606 NUBP2 CEMP1 TELO2 SNHG19 SYNGR3 C1QTNF8 MIR4717 SNHG9 LUC7L MIR6767 UNKL NDUFB10 ZNF598 E4F1 MIR4516 HN1L RHBDF1 NTHL1 RPUSD1 SOX8 FAM173A WDR90 PRR35 LINC00235 RAB40C RAB11FIP3 NHLRC4 MIR3178 NOXO1 LOC105371045 LOC105371038 DDX11L10 FAM234A PRSS29P SLC9A3R2 PRR25 LOC105371046 RHOT2 WDR24 TBL3 ECI1 PDIA2 PIGQ ATP6V0C MIR3677 DECR2 MIR5587 POLR3K
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss MSLN CCDC78 MIR3176 CAPN15 GNG13 MIR662 METTL26 WFIKKN1 LOC101929280 CHTF18 RPUSD1 STUB1 FAM173A WDR90 PRR35 LINC00235 RAB40C RAB11FIP3 NHLRC4 FBXL16 LOC107987233 LOC105371038 LOC100287175 JMJD8 LOC105371184 PRR25 RHBDL1 MCRIP2 HAGHL RHOT2 WDR24 METRN PIGQ MIR5587 NARFL
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss MSLN CCDC78 MIR3176 CAPN15 GNG13 MIR662 METTL26 WFIKKN1 LOC101929280 CHTF18 RPUSD1 STUB1 FAM173A WDR90 PRR35 LINC00235 RAB40C RAB11FIP3 NHLRC4 FBXL16 LOC107987233 LOC105371038 LOC100287175 JMJD8 LOC105371184 PRR25 RHBDL1 MCRIP2 HAGHL RHOT2 WDR24 METRN PIGQ MIR5587 NARFL
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion MSLN CCDC78 C1QTNF8 MIR3176 CAPN15 GNG13 MIR662 METTL26 WFIKKN1 LOC101929280 CHTF18 RPUSD1 SOX8 STUB1 FAM173A WDR90 PRR35 LINC00235 RAB40C RAB11FIP3 NHLRC4 LOC107984876 SSTR5 FBXL16 LOC107987233 SSTR5-AS1 LMF1 LOC105371038 LMF1-AS1 LOC100287175 JMJD8 LOC105371184 PRR25 RHBDL1 MCRIP2 HAGHL RHOT2 WDR24 METRN PIGQ MIR5587 NARFL
dgv4823n54 Chr.16:562698 - 662867 on Build GRCh38 Loss WFIKKN1 MCRIP2 LOC101929280 LOC107987233 WDR90 PIGQ PRR35 LOC105371038 LOC100287175 RAB40C NHLRC4 METTL26
nsv457304 Chr.16:554554 - 611142 on Build GRCh38 Gain LOC101929280 LOC107987233 PIGQ CAPN15 PRR35 RAB40C NHLRC4
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss CCDC78 LOC105371038 LOC100287175 JMJD8 LOC105371184 METTL26 RHBDL1 WFIKKN1 MCRIP2 LOC101929280 HAGHL RHOT2 WDR24 STUB1 METRN FAM173A WDR90 PIGQ RAB40C NARFL FBXL16
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication MSLN CCDC78 GNG13 MIR662 METTL26 WFIKKN1 LOC101929280 CHTF18 RPUSD1 STUB1 FAM173A WDR90 RAB40C FBXL16 LOC105371038 LOC100287175 JMJD8 LOC105371184 RHBDL1 MCRIP2 HAGHL RHOT2 WDR24 METRN PIGQ NARFL
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication MSLN CCDC78 MIR3176 CAPN15 GNG13 MIR662 METTL26 WFIKKN1 LOC101929280 CHTF18 RPUSD1 STUB1 FAM173A WDR90 PRR35 LINC00235 RAB40C RAB11FIP3 NHLRC4 FBXL16 LOC107987233 LOC105371038 LOC100287175 JMJD8 LOC105371184 PRR25 RHBDL1 MCRIP2 HAGHL RHOT2 WDR24 METRN PIGQ MIR5587 NARFL

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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