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Gene Symbol
NDE1
Assay Reference Genome
Location

Chr.16:15650492 on build GRCh38
Cytoband
16p13.11
Assay ID Hs03931191_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 54820

Gene Name:

 nudE neurodevelopment protein 1

Gene Aliases:

 HOM-TES-87, LIS4, MHAC, NDE, NUDE, NUDE1

Location:

 Chr.16:15643267-15726353 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NDE1 NM_001143979.1 NP_001137451.1
NM_017668.2 NP_060138.1
XM_005255396.4 XP_005255453.1
XM_006720897.3 XP_006720960.1
XM_011522553.2 XP_011520855.1
XM_017023349.1 XP_016878838.1
XM_017023350.1 XP_016878839.1
XM_017023351.1 XP_016878840.1
XM_017023352.1 XP_016878841.1
XM_017023353.1 XP_016878842.1
XM_017023354.1 XP_016878843.1
XM_017023355.1 XP_016878844.1
AK000108.1 BAA90949.1
AK025815.1
BC001421.2 AAH01421.1
BC033900.1 AAH33900.1
BP271845.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv435664 Chr.16:15247194 - 18197960 on Build GRCh38 Deletion ABCC6 MIR484 C16orf45 NPIPA5 FOPNL PKD1P1 KIAA0430 MIR6511A3 MIR3179-2 ABCC1 XYLT1 MIR6511A2 MIR3670-2 NDE1 MIR6506 NPIPA7 MYH11 MIR6770-2 NOMO3 PKD1P2 LOC102723692 MPV17L MIR3180-2
nsv469626 Chr.16:15599642 - 15766452 on Build GRCh38 Loss NDE1 MIR484 MIR6506 KIAA0430 MYH11
nsv1047898 Chr.16:15388065 - 18284986 on Build GRCh38 Loss ABCC6 MIR484 C16orf45 FOPNL PKD1P1 KIAA0430 MIR6511A3 MIR3179-2 ABCC1 XYLT1 MIR6511A2 MIR3670-2 NDE1 MIR6506 NPIPA7 MYH11 MIR6770-2 NOMO3 PKD1P2 LOC102723692 MPV17L MIR3180-2
nsv457428 Chr.16:15386022 - 18071186 on Build GRCh38 Gain ABCC6 MIR484 C16orf45 FOPNL PKD1P1 KIAA0430 MIR6511A3 MIR3179-2 ABCC1 XYLT1 MIR6511A2 MIR3670-2 NDE1 MIR6506 NPIPA7 MYH11 MIR6770-2 NOMO3 PKD1P2 LOC102723692 MPV17L MIR3180-2
nsv1125134 Chr.16:15180201 - 18091718 on Build GRCh38 Deletion ABCC6 MIR484 C16orf45 NPIPA5 FOPNL PKD1P1 KIAA0430 MIR6511A3 MIR3179-2 ABCC1 XYLT1 MIR6511A2 MIR3670-2 NDE1 MIR6506 NPIPA7 MYH11 MIR6770-2 NOMO3 PKD1P2 LOC102723692 MPV17L MIR3180-2
esv2714015 Chr.16:15292092 - 18247911 on Build GRCh38 Deletion ABCC6 MIR484 C16orf45 NPIPA5 FOPNL PKD1P1 KIAA0430 MIR6511A3 MIR3179-2 ABCC1 XYLT1 MIR6511A2 MIR3670-2 NDE1 MIR6506 NPIPA7 MYH11 MIR6770-2 NOMO3 PKD1P2 LOC102723692 MPV17L MIR3180-2

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More Information


Additional Information:

For this assay, SNP(s) [rs186766051] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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