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See other PIGQ CNV Assays ›
Gene Symbol
PIGQ
Assay Reference Genome
Location

Chr.16:576741 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03931525_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9091

Gene Name:

 phosphatidylinositol glycan anchor biosynthesis class Q

Gene Aliases:

 GPI1, c407A10.1

Location:

 Chr.16:569968-584136 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIGQ NM_004204.3 NP_004195.2
NM_148920.2 NP_683721.1
AB003723.1 BAA24948.1
AF030177.1 AAC32661.1
AK300297.1
AK314361.1
BC006377.2 AAH06377.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833113 Chr.16:506513 - 628160 on Build GRCh38 Loss RAB40C LINC00235 LOC107987233 NHLRC4 CAPN15 PRR35 MIR5587 MIR3176 PIGQ LOC101929280 RAB11FIP3
esv3637579 Chr.16:574322 - 585512 on Build GRCh38 Loss PIGQ
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication E4F1 NOXO1 MIR1225 HBA1 SLC9A3R2 SNHG19 MIR4516 LOC105371045 ECI1 LMF1 BAIAP3 RGS11 MRPS34 NDUFB10 LOC105371184 AMDHD2 HBM JMJD8 TPSG1 MAPK8IP3 RAB40C LOC105371049 MSRB1 WDR24 LOC107987233 FBXL16 ARHGDIG LOC107984876 HAGH HS3ST6 MSLN C16orf59 NPRL3 DDX11L10 RNPS1 DNASE1L2 LOC652276 SNORA10 SNORD60 HBZ POLR3K ATP6V0C CEMP1 TRAF7 HBA2 LUC7L RHOT2 STUB1 NTN3 LINC00235 WDR90 PRR35 LOC105371038 CRAMP1 PGP MIR6511B1 MPG CCNF C1QTNF8 BRICD5 MIR4717 NME3 WASIR2 IGFALS MIR940 IFT140 HN1L FAM173A LOC100287175 MIR3178 PRR25 MIR6767 PRSS29P LOC105371046 UBE2I FAHD1 GNPTG METRN PDIA2 ABCA3 MIR3180-5 PTX4 LOC729652 SNORA64 RAB26 MIR662 KCTD5 CAPN15 FLJ42627 MIR5587 WFIKKN1 CLCN7 RAB11FIP3 CACNA1H UNKL CCDC154 LOC106660606 NPW SNORA78 TPSAB1 RPL23AP5 MEIOB LOC105371047 LOC100134368 RHBDF1 MLST8 SPSB3 NUBP2 ABCA17P DECR2 ZNF598 RPL3L CCDC78 TELO2 TSC2 MIR6859-4 LINC00254 NHLRC4 MIR6768 ERVK13-1 MCRIP2 RNF151 TMEM8A C16orf91 TSR3 METTL26 RPUSD1 RPS2 MIR3176 PIGQ TBL3 HBQ1 MRPL28 LMF1-AS1 NME4 CHTF18 EME2 TPSD1 MIR3177 LOC101929280 SOX8 PDPK1 NTHL1 HAGHL SYNGR3 FAM234A TMEM204 TPSB2 SNHG9 NARFL TBC1D24 AXIN1 PRSS27 SNRNP25 MIR3677 GNG13 GFER CASKIN1 RHBDL1 SSTR5 PKD1 SSTR5-AS1
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss RHOT2 STUB1 METTL26 LINC00235 WDR90 PRR35 RPUSD1 MIR3176 PIGQ LOC105371038 MIR662 CAPN15 CHTF18 LOC105371184 MIR5587 WFIKKN1 LOC101929280 JMJD8 RAB11FIP3 RAB40C HAGHL WDR24 LOC107987233 FBXL16 FAM173A LOC100287175 NARFL MSLN PRR25 GNG13 CCDC78 NHLRC4 RHBDL1 MCRIP2 METRN
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss RHOT2 STUB1 METTL26 LINC00235 WDR90 PRR35 RPUSD1 MIR3176 PIGQ LOC105371038 MIR662 CAPN15 CHTF18 LOC105371184 MIR5587 WFIKKN1 LOC101929280 JMJD8 RAB11FIP3 RAB40C HAGHL WDR24 LOC107987233 FBXL16 FAM173A LOC100287175 NARFL MSLN PRR25 GNG13 CCDC78 NHLRC4 RHBDL1 MCRIP2 METRN
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion RHOT2 STUB1 METTL26 LINC00235 WDR90 PRR35 RPUSD1 MIR3176 PIGQ LOC105371038 LMF1-AS1 MIR662 C1QTNF8 LMF1 CAPN15 CHTF18 LOC105371184 MIR5587 WFIKKN1 LOC101929280 JMJD8 RAB11FIP3 SOX8 RAB40C HAGHL WDR24 LOC107987233 FBXL16 FAM173A LOC107984876 LOC100287175 NARFL MSLN PRR25 GNG13 CCDC78 NHLRC4 RHBDL1 SSTR5 MCRIP2 SSTR5-AS1 METRN
dgv4823n54 Chr.16:562698 - 662867 on Build GRCh38 Loss RAB40C METTL26 LOC107987233 WDR90 NHLRC4 PRR35 LOC100287175 PIGQ WFIKKN1 MCRIP2 LOC101929280 LOC105371038
nsv457304 Chr.16:554554 - 611142 on Build GRCh38 Gain RAB40C LOC107987233 NHLRC4 CAPN15 PRR35 PIGQ LOC101929280
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication RHOT2 STUB1 METTL26 LINC00235 WDR90 PRR35 RPUSD1 MIR3176 PIGQ LOC105371038 MIR662 CAPN15 CHTF18 LOC105371184 MIR5587 WFIKKN1 LOC101929280 JMJD8 RAB11FIP3 RAB40C HAGHL WDR24 LOC107987233 FBXL16 FAM173A LOC100287175 NARFL MSLN PRR25 GNG13 CCDC78 NHLRC4 RHBDL1 MCRIP2 METRN

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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