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Gene Symbol
TPSD1
Assay Reference Genome
Location

Chr.16:1257725 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03932387_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 23430

Gene Name:

 tryptase delta 1

Gene Aliases:

 MCP7-LIKE, MCP7L1, MMCP-7L

Location:

 Chr.16:1256272-1258493 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TPSD1 NM_012217.2 NP_036349.1
AF206664.1 AAG35694.1
AY055427.1 AAL17874.1
BC069143.1 AAH69143.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PDIA2 NDUFB10 C16orf59 LMF1 MIR5587 WDR24 C16orf91 NTHL1 LOC105371049 SNORA10 MRPS34 TBC1D24 MIR4717 PIGQ AXIN1 CCDC154 LOC105371038 GNPTG MRPL28 TSR3 NHLRC4 TPSAB1 ECI1 LOC106660606 GNG13 BAIAP3 RHOT2 FAM234A LOC107984876 PDPK1 HBA1 LMF1-AS1 FLJ42627 METRN MSRB1 POLR3K PRR35 RNPS1 DDX11L10 HAGH LOC652276 NTN3 PKD1 MIR3677 SPSB3 CEMP1 PRSS29P MIR3178 LOC100134368 DECR2 RPS2 MEIOB MIR3176 DNASE1L2 RHBDL1 SNRNP25 LOC729652 PGP CACNA1H E4F1 WFIKKN1 SNHG19 SNORA78 SSTR5-AS1 MIR662 WDR90 CRAMP1 IGFALS RAB11FIP3 SLC9A3R2 LOC107987233 NPRL3 HS3ST6 SNORD60 RGS11 RAB40C PRSS27 STUB1 SYNGR3 LOC100287175 NOXO1 EME2 TMEM8A SOX8 NME3 CCNF IFT140 HBZ MIR6768 TELO2 HBM MAPK8IP3 TMEM204 RPUSD1 PRR25 MPG TPSB2 UBE2I ATP6V0C MIR1225 LINC00235 TBL3 RPL3L HBA2 MIR6511B1 FAHD1 MIR6859-4 MIR940 HAGHL FBXL16 MSLN FAM173A MLST8 MIR4516 LUC7L SNORA64 WASIR2 TPSD1 RAB26 RHBDF1 HBQ1 MIR6767 RPL23AP5 MIR3177 LOC105371047 ABCA17P PTX4 LOC105371045 CAPN15 MIR3180-5 NME4 LOC105371184 ARHGDIG ZNF598 NUBP2 ABCA3 CCDC78 LOC101929280 METTL26 ERVK13-1 MCRIP2 JMJD8 TPSG1 HN1L SNHG9 GFER SSTR5 NPW NARFL BRICD5 TSC2 C1QTNF8 AMDHD2 TRAF7 LINC00254 UNKL CHTF18 CASKIN1 CLCN7 RNF151 LOC105371046 KCTD5
nsv571109 Chr.16:1205545 - 1287716 on Build GRCh38 Gain CACNA1H PRSS29P TPSAB1 TPSB2 TPSD1 TPSG1
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss LMF1 PRSS29P BAIAP3 SSTR5 C1QTNF8 LMF1-AS1 CACNA1H GNPTG SOX8 TSR3 UNKL SSTR5-AS1 TPSAB1 TPSB2 TPSD1 UBE2I TPSG1
nsv1051302 Chr.16:1162523 - 1299208 on Build GRCh38 Gain CACNA1H PRSS29P TPSAB1 TPSB2 TPSD1 TPSG1
nsv1046885 Chr.16:1063695 - 1299208 on Build GRCh38 Gain CACNA1H PRSS29P SSTR5 SSTR5-AS1 TPSAB1 TPSB2 TPSD1 C1QTNF8 TPSG1
nsv1708 Chr.16:1228093 - 1263588 on Build GRCh38 Deletion PRSS29P TPSAB1 TPSB2 TPSD1
nsv833117 Chr.16:1217597 - 1318867 on Build GRCh38 Loss CACNA1H PRSS29P TPSAB1 TPSB2 TPSD1 UBE2I TPSG1
nsv571101 Chr.16:1078406 - 1287716 on Build GRCh38 Gain CACNA1H PRSS29P SSTR5 SSTR5-AS1 TPSAB1 TPSB2 TPSD1 C1QTNF8 TPSG1
nsv571108 Chr.16:1202441 - 1283386 on Build GRCh38 Loss CACNA1H PRSS29P TPSAB1 TPSB2 TPSD1 TPSG1
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss LMF1 PRSS29P C16orf91 BAIAP3 SSTR5 LOC105371045 LOC107984876 C1QTNF8 LMF1-AS1 CCDC154 CACNA1H GNPTG SOX8 TSR3 UNKL CLCN7 SSTR5-AS1 TPSAB1 TPSB2 TPSD1 UBE2I TPSG1
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain PRSS29P BAIAP3 SSTR5 C1QTNF8 CACNA1H GNPTG TSR3 UNKL SSTR5-AS1 TPSAB1 TPSB2 TPSD1 UBE2I TPSG1
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion PRSS29P C16orf91 BAIAP3 TELO2 LOC105371047 PTX4 TMEM204 LOC105371045 CCDC154 CACNA1H GNPTG TSR3 UNKL CLCN7 TPSAB1 TPSB2 TPSD1 UBE2I TPSG1 IFT140
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss PRSS29P C16orf91 BAIAP3 GNPTG TSR3 UNKL TPSAB1 TPSD1 UBE2I
esv3581926 Chr.16:1247258 - 1270592 on Build GRCh38 Loss PRSS29P TPSD1
nsv515770 Chr.16:1257675 - 1299928 on Build GRCh38 Loss PRSS29P TPSD1
nsv571105 Chr.16:1148938 - 1263381 on Build GRCh38 Loss CACNA1H PRSS29P TPSAB1 TPSB2 TPSD1 TPSG1

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More Information


Additional Information:

For this assay, SNP(s) [rs116528198,rs74981201] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Function(s) Process(es)


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