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Gene Symbol
SPATA2L
Assay Reference Genome
Location

Chr.16:89699354 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03932472_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 124044

Gene Name:

 spermatogenesis associated 2 like

Gene Aliases:

 C16orf76, tamo

Location:

 Chr.16:89696357-89701993 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA2L NM_152339.3 NP_689552.2
XM_005256279.4 XP_005256336.1
AK127372.1
BC027606.1 AAH27606.1
BC039608.1 AAH39608.1
BC053588.1 AAH53588.1
BI917028.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952079 Chr.16:89685593 - 89749492 on Build GRCh38 Deletion SPATA2L VPS9D1-AS1 VPS9D1 CDK10 FANCA ZNF276
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain SPATA33 SPATA2L SPIRE2 LOC105371419 VPS9D1-AS1 VPS9D1 CDK10 LOC107984817 FANCA ZNF276
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss SPATA2L LOC105371419 TCF25 VPS9D1 LOC107984817 GAS8 TUBB3 AFG3L1P FANCA ZNF276 DPEP1 CENPBD1 SPATA33 SPIRE2 CHMP1A VPS9D1-AS1 CDK10 MC1R DBNDD1 GAS8-AS1 DEF8
nsv516241 Chr.16:89696002 - 89723490 on Build GRCh38 Loss SPATA2L VPS9D1-AS1 VPS9D1 CDK10 ZNF276
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss LOC105371419 TCF25 VPS9D1 LOC107984817 GAS8 TUBB3 TUBB8P7 SPG7 AFG3L1P ANKRD11 FANCA LOC100287036 SNORD68 DPEP1 CHMP1A VPS9D1-AS1 CDK10 LOC105371414 URAHP DBNDD1 DEF8 FAM157C ZNF778 SPATA2L LOC101927817 RPL13 ZNF276 CENPBD1 PRDM7 SPATA33 SPIRE2 MC1R GAS8-AS1 CPNE7
nsv833330 Chr.16:89678466 - 89741783 on Build GRCh38 Loss SPATA2L VPS9D1-AS1 VPS9D1 CDK10 FANCA ZNF276
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC105371419 IL17C TCF25 LOC107984817 GAS8 MIR4722 AFG3L1P LOC100129697 SNAI3-AS1 ANKRD11 FANCA SNORD68 DPEP1 RNF166 CHMP1A VPS9D1-AS1 CDH15 CTU2 LOC105371414 DBNDD1 GALNS CYBA DEF8 PIEZO1 RPL13 ACSF3 SPIRE2 APRT LOC400558 GAS8-AS1 CPNE7 LOC339059 PABPN1L VPS9D1 LOC101927793 TUBB3 TUBB8P7 SPG7 LOC100287036 TRAPPC2L CBFA2T3 SLC22A31 CDK10 URAHP FAM157C ZNF778 SNAI3 SPATA2L CDT1 LINC00304 LOC101927817 LOC107987238 ZNF276 MVD CENPBD1 PRDM7 SPATA33 LOC100289580 LOC105371409 MC1R
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion SPATA2L VPS9D1 SPG7 RPL13 FANCA ZNF276 SNORD68 DPEP1 SPATA33 CHMP1A VPS9D1-AS1 CDK10 CPNE7

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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