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See other GNPTG CNV Assays ›
Gene Symbol
GNPTG
Assay Reference Genome
Location

Chr.16:1356198 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03932479_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84572

Gene Name:

 N-acetylglucosamine-1-phosphate transferase gamma subunit

Gene Aliases:

 C16orf27, GNPTAG, LP2537, RJD9

Location:

 Chr.16:1351899-1363351 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GNPTG NM_032520.4 NP_115909.1
XM_017023782.1 XP_016879271.1
AF302786.1 AAG27706.1
AK312067.1
AY203933.1 AAP34456.1
BC014592.1 AAH14592.1
BC131525.1
BU145878.1
DT219524.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain TELO2 CCDC154 GNPTG TSR3 CLCN7 PTX4 BAIAP3 IFT140 UNKL UBE2I C16orf91 LOC105371045
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MRPS34 MIR4717 TSR3 RNPS1 MIR3180-5 NARFL MCRIP2 NTN3 RPL23AP5 SNORA64 LOC105371045 SSTR5-AS1 SNORD60 NTHL1 LOC652276 MSRB1 GNPTG NUBP2 MIR4516 LMF1 IFT140 LOC106660606 PRSS29P IGFALS SLC9A3R2 ZNF598 FAHD1 RHBDL1 LOC100134368 TPSAB1 FLJ42627 MIR3177 SNORA78 SOX8 CEMP1 MAPK8IP3 EME2 RGS11 METRN LINC00235 MIR3677 HAGHL LOC105371046 RAB40C TPSB2 ABCA3 BRICD5 LOC100287175 PGP DECR2 LOC107987233 FAM234A RPL3L LOC105371047 ERVK13-1 TRAF7 RHBDF1 LOC729652 HBA2 CCDC78 MIR3176 TBC1D24 JMJD8 AXIN1 KCTD5 WASIR2 MIR6767 DDX11L10 HN1L STUB1 LINC00254 NPW PDPK1 SNHG9 NPRL3 HBQ1 CLCN7 CRAMP1 PDIA2 CHTF18 PKD1 MIR6511B1 SNORA10 METTL26 LOC105371184 E4F1 HBM C1QTNF8 MIR940 SYNGR3 NME4 CACNA1H NHLRC4 TELO2 MLST8 LMF1-AS1 HS3ST6 PTX4 BAIAP3 UNKL MIR3178 C16orf59 LUC7L NME3 LOC107984876 PRR25 MIR5587 MIR662 HBZ MPG LOC101929280 HAGH ARHGDIG HBA1 RPUSD1 PRR35 LOC105371038 CASKIN1 MEIOB TPSG1 LOC105371049 TMEM8A MIR1225 TSC2 DNASE1L2 SNRNP25 RHOT2 CAPN15 AMDHD2 SPSB3 PRSS27 MSLN FAM173A MIR6859-4 POLR3K RAB26 SSTR5 ABCA17P CCDC154 RAB11FIP3 GFER FBXL16 WDR90 C16orf91 WDR24 CCNF ATP6V0C PIGQ NOXO1 RNF151 TMEM204 NDUFB10 MIR6768 UBE2I TPSD1 ECI1 WFIKKN1 GNG13 TBL3 SNHG19 MRPL28 RPS2
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss LOC107984876 SSTR5-AS1 GNPTG TSR3 LMF1 PRSS29P C1QTNF8 UBE2I TPSB2 TPSD1 CACNA1H TPSG1 SSTR5 CCDC154 LMF1-AS1 TPSAB1 CLCN7 BAIAP3 UNKL C16orf91 SOX8 LOC105371045
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain SSTR5-AS1 GNPTG TSR3 PRSS29P C1QTNF8 UBE2I TPSB2 TPSD1 CACNA1H TPSG1 SSTR5 TPSAB1 BAIAP3 UNKL
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss SSTR5-AS1 GNPTG TSR3 LMF1 PRSS29P C1QTNF8 UBE2I TPSB2 TPSD1 CACNA1H TPSG1 SSTR5 LMF1-AS1 TPSAB1 BAIAP3 UNKL SOX8
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion GNPTG TMEM204 TSR3 IFT140 PRSS29P UBE2I TPSB2 TPSD1 CACNA1H TPSG1 TELO2 CCDC154 TPSAB1 CLCN7 LOC105371047 PTX4 BAIAP3 UNKL C16orf91 LOC105371045
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss GNPTG TSR3 TPSAB1 BAIAP3 PRSS29P UNKL UBE2I C16orf91 TPSD1

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