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See other CDK10 CNV Assays ›
Gene Symbol
CDK10
Assay Reference Genome
Location

Chr.16:89688599 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03932729_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8558

Gene Name:

 cyclin dependent kinase 10

Gene Aliases:

 PISSLRE

Location:

 Chr.16:89686612-89696364 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDK10 NM_001098533.2 NP_001092003.2
NM_001160367.1 NP_001153839.1
NM_052987.3 NP_443713.2
NM_052988.4 NP_443714.3
NR_027702.1
NR_027703.1
XM_006721308.2 XP_006721371.1
XM_006721310.2 XP_006721373.1
XM_011523405.2 XP_011521707.1
XM_011523406.2 XP_011521708.1
XM_011523407.2 XP_011521709.1
XM_011523408.2 XP_011521710.1
XM_011523410.2 XP_011521712.1
XM_011523411.2 XP_011521713.1
XM_011523412.1 XP_011521714.1
XM_011523413.2 XP_011521715.1
XM_011523414.2 XP_011521716.1
XM_011523415.2 XP_011521717.1
XM_011523416.2 XP_011521718.1
XM_011523417.2 XP_011521719.1
XM_017023806.1 XP_016879295.1
XM_017023807.1 XP_016879296.1
XM_017023808.1 XP_016879297.1
XM_017023809.1 XP_016879298.1
XM_017023810.1 XP_016879299.1
AB209829.1 BAD93066.1
AF153430.1 AAF18371.1
AK075036.1
AK131531.1
AK290485.1
AK292351.1
AK295397.1
AK296631.1
AK298386.1
AK312016.1
BC017342.2 AAH17342.1
BC025301.1
CX867290.1
DB118903.1
DC362478.1
L33264.1 AAA60092.2
X78342.1 CAA55137.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639592 Chr.16:89680115 - 89694466 on Build GRCh38 Gain CDK10
nsv952079 Chr.16:89685593 - 89749492 on Build GRCh38 Deletion FANCA SPATA2L CDK10 VPS9D1-AS1 VPS9D1 ZNF276
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain FANCA SPATA33 SPIRE2 SPATA2L CDK10 VPS9D1-AS1 LOC105371419 VPS9D1 LOC107984817 ZNF276
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss FANCA SPATA33 SPIRE2 CHMP1A VPS9D1-AS1 GAS8 LOC107984817 TCF25 SPATA2L CDK10 DEF8 GAS8-AS1 LOC105371419 VPS9D1 CENPBD1 AFG3L1P ZNF276 DBNDD1 TUBB3 MC1R DPEP1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss FANCA SPIRE2 LOC107984817 TCF25 PRDM7 TUBB8P7 SPATA2L CPNE7 RPL13 LOC100287036 DEF8 GAS8-AS1 VPS9D1 LOC105371414 CENPBD1 ZNF276 MC1R DPEP1 ZNF778 SPATA33 CHMP1A LOC101927817 SPG7 VPS9D1-AS1 GAS8 URAHP ANKRD11 SNORD68 CDK10 LOC105371419 FAM157C AFG3L1P DBNDD1 TUBB3
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain SPATA33 SPATA2L CDK10 CHMP1A DPEP1
nsv833330 Chr.16:89678466 - 89741783 on Build GRCh38 Loss FANCA SPATA2L CDK10 VPS9D1-AS1 VPS9D1 ZNF276
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SPIRE2 PIEZO1 PRDM7 TUBB8P7 SPATA2L CPNE7 MIR4722 LOC100129697 CENPBD1 ZNF276 PABPN1L DPEP1 SNAI3-AS1 LOC101927817 VPS9D1-AS1 GAS8 URAHP CDT1 ANKRD11 LOC101927793 LOC100289580 CDK10 LOC339059 AFG3L1P FANCA APRT LOC105371409 LOC107984817 LOC400558 TCF25 CTU2 RPL13 LOC100287036 DEF8 GAS8-AS1 VPS9D1 LOC105371414 MVD GALNS MC1R ZNF778 CDH15 RNF166 SPATA33 CHMP1A SPG7 ACSF3 LINC00304 LOC107987238 TRAPPC2L CYBA IL17C SNAI3 CBFA2T3 SNORD68 LOC105371419 FAM157C SLC22A31 DBNDD1 TUBB3
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion FANCA SPATA33 CHMP1A SPG7 VPS9D1-AS1 SNORD68 SPATA2L CDK10 CPNE7 RPL13 VPS9D1 ZNF276 DPEP1

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More Information


Additional Information:

For this assay, SNP(s) [rs191985005] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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