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See other GNPTG CNV Assays ›
Gene Symbol
GNPTG
Assay Reference Genome
Location

Chr.16:1355313 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03932913_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84572

Gene Name:

 N-acetylglucosamine-1-phosphate transferase gamma subunit

Gene Aliases:

 C16orf27, GNPTAG, LP2537, RJD9

Location:

 Chr.16:1351899-1363351 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GNPTG NM_032520.4 NP_115909.1
XM_017023782.1 XP_016879271.1
AF302786.1 AAG27706.1
AK312067.1
AY203933.1 AAP34456.1
BC014592.1 AAH14592.1
BC131525.1
BU145878.1
DT219524.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain IFT140 UNKL TSR3 BAIAP3 UBE2I LOC105371045 C16orf91 PTX4 TELO2 CLCN7 CCDC154 GNPTG
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC105371184 NPRL3 BRICD5 NARFL NTHL1 C1QTNF8 SNORD60 WDR24 CCDC154 NDUFB10 ATP6V0C MIR6859-4 LOC729652 LOC107987233 WDR90 TMEM204 HBA1 ERVK13-1 NME3 METRN DNASE1L2 HBQ1 RPL23AP5 C16orf91 SNORA64 PTX4 TMEM8A CEMP1 MIR662 LINC00254 SNHG9 RHBDF1 MRPL28 ZNF598 MSLN MIR5587 LMF1-AS1 MRPS34 RAB11FIP3 AMDHD2 TPSB2 LOC107984876 E4F1 MIR1225 DDX11L10 HS3ST6 MPG TBL3 LOC652276 SSTR5-AS1 WFIKKN1 CCNF PDIA2 MIR3677 NOXO1 AXIN1 GNG13 MCRIP2 CRAMP1 MEIOB ARHGDIG MIR3180-5 HAGH C16orf59 HAGHL SNRNP25 TPSD1 HBA2 TSC2 RNPS1 MIR4516 LOC100134368 TSR3 PIGQ SPSB3 GFER DECR2 LINC00235 RHBDL1 TPSAB1 LOC105371049 MIR3177 FAM234A POLR3K NPW LOC106660606 MIR6767 UBE2I LOC105371046 MLST8 PRSS29P SOX8 MIR6768 TBC1D24 MIR940 SNORA78 UNKL PGP TPSG1 STUB1 CLCN7 RPS2 FLJ42627 KCTD5 PRR25 RAB26 LOC105371045 CASKIN1 WASIR2 NTN3 SNHG19 SLC9A3R2 LOC105371038 METTL26 LOC105371047 RGS11 SYNGR3 CACNA1H RNF151 TELO2 CCDC78 CAPN15 PKD1 PRSS27 ABCA17P PRR35 PDPK1 BAIAP3 NUBP2 LMF1 RAB40C LOC101929280 MIR4717 TRAF7 MSRB1 LUC7L MIR3176 NME4 SNORA10 NHLRC4 JMJD8 IFT140 ECI1 ABCA3 CHTF18 SSTR5 RHOT2 GNPTG FBXL16 HBM EME2 IGFALS MIR3178 HBZ MIR6511B1 MAPK8IP3 RPL3L FAM173A RPUSD1 FAHD1 LOC100287175 HN1L
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss TPSB2 BAIAP3 LOC107984876 C1QTNF8 UBE2I LOC105371045 SSTR5 LMF1 C16orf91 PRSS29P CCDC154 GNPTG SOX8 TPSD1 UNKL TSR3 LMF1-AS1 TPSG1 CACNA1H SSTR5-AS1 CLCN7 TPSAB1
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain TPSB2 BAIAP3 C1QTNF8 UBE2I SSTR5 PRSS29P GNPTG TPSD1 UNKL TSR3 TPSG1 CACNA1H SSTR5-AS1 TPSAB1
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss TPSB2 BAIAP3 C1QTNF8 UBE2I SSTR5 LMF1 PRSS29P GNPTG SOX8 TPSD1 UNKL TSR3 LMF1-AS1 TPSG1 CACNA1H SSTR5-AS1 TPSAB1
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion IFT140 TPSB2 BAIAP3 UBE2I LOC105371045 C16orf91 PTX4 PRSS29P CCDC154 GNPTG TPSD1 UNKL TSR3 TMEM204 LOC105371047 TPSG1 CACNA1H TELO2 CLCN7 TPSAB1
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss UNKL TSR3 BAIAP3 UBE2I C16orf91 PRSS29P GNPTG TPSD1 TPSAB1

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